Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0550
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    29   0.030
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.64 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.64 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   1.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   3.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.9  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 29.1 bits (62), Expect = 0.030
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +3

Query: 174 PGHVDREHTEVSDGSGVVRGKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSE 350
           P  VD E   VS GS       +Y  P  +  ++ YVAD+ GF    S +P   P   E
Sbjct: 60  PKQVDNETPVVSQGSD------SYTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPE 112


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 283 WLTRKASIRY*ATCLQSTQLTLNP 354
           W+   ++ ++   CLQ TQL +NP
Sbjct: 72  WIGELSATKFGFPCLQYTQLPVNP 95


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 283 WLTRKASIRY*ATCLQSTQLTLNP 354
           W+   ++ ++   CLQ TQL +NP
Sbjct: 72  WIGELSATKFGFPCLQYTQLPVNP 95


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 19/69 (27%), Positives = 28/69 (40%)
 Frame = +3

Query: 327 PEHPADSESVALAKDRHFQLYSKIAEEHAQHPHPYETSVPRQSAAVAEATLKHSELFRVI 506
           P+H   S S + A      +Y  ++   A H H  + +V   +AA   AT      F   
Sbjct: 69  PQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQQAV---AAAAFGATSSMVPGFGST 125

Query: 507 AEQHARIAA 533
           A   A +AA
Sbjct: 126 AASSAALAA 134


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 258 HKGRTVDYVADKEGFH 305
           H G  V+   DK+GFH
Sbjct: 192 HSGEEVNIFLDKKGFH 207


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +3

Query: 417 HPHPYETSVPRQSAAVAEATL-KHSELFRVIAE 512
           HPHP ET  P+    +  A     +EL  ++ E
Sbjct: 466 HPHPPETPGPQVETILQNACFCARNELMMILKE 498


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 408 HAQHPHPYETSVPRQSAAVAEATLKHSELFRVIAEQHARIAA 533
           H QHPH        QS A  +    H +      +Q ++ A+
Sbjct: 173 HTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAAS 214


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 194 FPVNVSRGIVQQYRRTRR 141
           +P+   + ++  YRRTRR
Sbjct: 123 YPLRPPQEVISHYRRTRR 140


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 102 LTSRRPRLTLHRSPTCSP 155
           +T  + R+ L +SP C P
Sbjct: 197 ITPAKKRIKLEQSPLCPP 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,945
Number of Sequences: 438
Number of extensions: 3175
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)