Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0549
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.26 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   0.80 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.9  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 347 CRASTMTFWFSLVHS*QILELLTAPFYRPGCAAIESVSSFLDG 219
           C   +   W  +++     E  T   Y PGCA ++S S+ L G
Sbjct: 356 CPTRSHAVWEMVLNELDRREDPTNDEYLPGCAMVDSCSNILTG 398


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 119 DLYAHM-GIFDNIFYFHIDIDNVHVTIW 39
           D+Y+ +  + DN   FH+  D V++T W
Sbjct: 351 DIYSDLLDLTDNNELFHLGSDEVNLTCW 378


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 370 FCFV*DPCVGPPP*RFGFRSYILN 299
           FC   DP   PPP   G   Y L+
Sbjct: 127 FCHNGDPLSQPPPAHMGIPPYQLD 150


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 370 FCFV*DPCVGPPP*RFGFRSYILN 299
           FC   DP   PPP   G   Y L+
Sbjct: 19  FCHNGDPLSQPPPAHMGIPPYQLD 42


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 322 QNVMVEALHKDLRRSKMEAILLEVDYLINDLRN 420
           Q+  +E +H+   +  +   L EV +  N +RN
Sbjct: 74  QDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRN 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,719
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)