Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0549
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 49 3e-06
02_05_0128 - 26059348-26059437,26059553-26059759 42 3e-04
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 41 8e-04
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 39 0.003
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 33 0.16
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 33 0.21
08_02_0591 - 19051748-19051807,19053044-19053133,19053238-190533... 30 1.5
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 28 6.1
02_03_0150 - 15750329-15750450,15751554-15751644,15751967-157520... 28 6.1
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 27 8.0
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 8.0
03_02_0708 + 10577931-10579511,10579613-10579706,10580694-105808... 27 8.0
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 27 8.0
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE------------H 459
E + + +ALH DL + +ME+ L E+ L L W KPE
Sbjct: 41 EREGDISDALHSDLAKPRMESYLHEISLAKAACTFALKGLKNWMKPEKMLIMLTLINDDQ 100
Query: 460 PPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLP 573
P I ++P GVVLVI AWNYP L + P
Sbjct: 101 VPAALTTFPSTAQIVSEPLGVVLVISAWNYPFLLSIDP 138
>02_05_0128 - 26059348-26059437,26059553-26059759
Length = 98
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 313 SENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE 456
+E ++ + +ALH DL + ++E+ EV L +RNTL L +W PE
Sbjct: 44 TEEEDAIFDALHDDLGKHRVESFRDEVGVLAKSVRNTLQNLKKWASPE 91
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 222 VQKARDTFNRGTTRPIEWRRQQLKNLLRM 308
V R+ + G T+ +EWR+ QL L+RM
Sbjct: 14 VAGVREEYESGRTKELEWRKAQLGGLIRM 42
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 388 EVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLL 567
E+ + + + L L +W KP+ + + +P GVVLVI AWNYP L +
Sbjct: 48 EIALVKSSCKFALKNLKKWMKPQKVTAPLMTFPSTARVAAEPLGVVLVISAWNYPFLLSI 107
Query: 568 LP 573
P
Sbjct: 108 DP 109
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 222 VQKARDTFNRGTTRPIEWRRQQLKNLLRM 308
V R F G TR EWR QL+ +LRM
Sbjct: 13 VAALRGRFAAGGTRGAEWRAAQLRGILRM 41
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEV 495
E+Q+++ E +D ++ ++A L E+ + L ++W KPE+ G + +
Sbjct: 161 EHQDLICEISSRDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKA 220
Query: 496 VIYNDPYGVVLVIGAWNYPLQLLLLP 573
+ P GV+ I +WNYP + P
Sbjct: 221 KVEFYPLGVIGAIVSWNYPFHNVFNP 246
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 222 VQKARDTFNRGTTRPIEWRRQQLKNLLRM 308
V + R + G TR +EWR+ QL+ LLR+
Sbjct: 30 VAELRAAYESGRTRSLEWRQSQLRGLLRL 58
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +1
Query: 313 SENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDE 492
+E + AL +DL + + EA E+ L+ L + W +
Sbjct: 60 AEEEAAAFRALREDLGKHQAEAYRDEIGVLVKSANAALR--EVWVP-------LIAFPAR 110
Query: 493 VVIYNDPYGVVLVIGAWNYPLQLLLLP 573
+ P GV+LV WN PL L L P
Sbjct: 111 AQLEPQPLGVILVFSCWNVPLGLSLEP 137
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 222 VQKARDTFNRGTTRPIEWRRQQLKNLLRMYERK 320
V R+ + G T+ +EWR+ QLK L+R+ K
Sbjct: 15 VSGLREVYESGRTKDLEWRQSQLKALIRLLTDK 47
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 313 SENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE 456
++ + + LH DL + + E+ E+ L+ ++ TL L +W E
Sbjct: 45 TDKEEEIFAVLHDDLGKHRGESFRDELGILVKSIKYTLQNLKKWAASE 92
>08_02_0591 -
19051748-19051807,19053044-19053133,19053238-19053363,
19053920-19054104,19054644-19054818,19057111-19057191,
19057242-19057265,19057581-19057753,19057847-19058123,
19059093-19059149,19059604-19059699
Length = 447
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 304 ECTSENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTK 450
E + ++Q M + + LR+ E +LLE Y++ND N L++ +K
Sbjct: 358 ESSGKSQMAMEKMVEGRLRKYFEEVVLLEQKYVVNDSTNIKSVLNDLSK 406
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 490 EVVIYNDPYGVVLVIGAWNYPL 555
E + +P GVV +I WNYPL
Sbjct: 146 ESYVLKEPIGVVGLITPWNYPL 167
>02_03_0150 -
15750329-15750450,15751554-15751644,15751967-15752053,
15752605-15752660,15752812-15752893,15753141-15753217,
15754028-15754138,15754744-15754906,15755375-15755433,
15755882-15756011
Length = 325
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 394 DYLINDLRNTLHYLDEWTKPEHPPKGFV-NILDEVVIYNDPYGVVL 528
D +IN ++ L +DEW K H G +L + +D VL
Sbjct: 183 DLVINQKKDLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVL 228
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 346 HKDLRRSKMEAILLEVDY-LINDLRNTLHYLDEWTKPEHPP 465
H+ LRR K EA+ + +Y L +D+ + L E PE+ P
Sbjct: 429 HEKLRRYKKEAVSMIHEYFLSDDVPEIIRSLKELGSPEYNP 469
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 502 YNDPYGVVLVIGAWNYPLQLLLL 570
Y PYG V +I +N+PL++ LL
Sbjct: 192 YRWPYGPVAIITPFNFPLEIPLL 214
>03_02_0708 +
10577931-10579511,10579613-10579706,10580694-10580856,
10581286-10581491,10581854-10582062
Length = 750
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -3
Query: 140 ITSAHFIDLYAHMGIFDNIFYFHIDIDNVHVTIWYVRFG 24
I S+ +D+YA G D + I HV++W G
Sbjct: 222 ILSSSLVDMYAKCGRIDVAIGIFMTIKRNHVSVWNTMIG 260
>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 214 LRPSKKLETLSIAAQPGR*NGAVSSSRIC 300
+RPS + +SI++QP +G+V+SS +C
Sbjct: 1669 MRPSDIAKEVSISSQPCLFSGSVNSSDVC 1697
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,691,942
Number of Sequences: 37544
Number of extensions: 316024
Number of successful extensions: 831
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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