Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0549
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   1.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   3.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   3.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   8.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.7  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 236 RHFQSRHNQADRMAPSAAQEFVKNVRAKTKTS 331
           RHFQ +H Q+D +      EF  N R +TK S
Sbjct: 23  RHFQDKHEQSDTL---YVCEFC-NRRYRTKNS 50


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 221 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRAKTKTSWWR 340
           RPK  +    +  Q D  AP+A +  V+ V  K +   WR
Sbjct: 365 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPRYMVWR 403


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 221 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRAKTKTSWWR 340
           RPK  +    +  Q D  AP+A +  V+ V  K +   WR
Sbjct: 280 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPRYMVWR 318


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 221 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRAKTKTSWWR 340
           RPK  +    +  Q D  AP+A +  V+ V  K +   WR
Sbjct: 599 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPRYMVWR 637


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 80  YFHIDIDNVHVTIWYVRFG 24
           Y H+   +VHV IW + FG
Sbjct: 50  YLHLLYQDVHVMIW-IGFG 67


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 457 HPPKGFVNILDEVVIYNDP 513
           +PPKG  +   +V++ N P
Sbjct: 332 NPPKGAADFTAQVIVLNHP 350


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 131 AHFIDLYAHMGIFDNIFYFHIDIDNVHVTIWY 36
           A F++    +GI +NIF     I+   +T  Y
Sbjct: 400 ASFLERERFLGIINNIFKNMSQIEREAITFQY 431


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 391 VDYLINDLRNTLHYLDEWTKPEHP 462
           V+ + N LRN L  +     P+HP
Sbjct: 359 VERMHNKLRNALQTVLAQNHPQHP 382


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 131 AHFIDLYAHMGIFDNIFYFHIDIDNVHVTIWY 36
           A F++    +GI +NIF     I+   +T  Y
Sbjct: 400 ASFLERERFLGIINNIFKNMSQIEREAITFQY 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,401
Number of Sequences: 438
Number of extensions: 3248
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)