Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0549
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 59 2e-09
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 59 2e-09
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 57 1e-08
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 57 1e-08
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 56 1e-08
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 37 0.008
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 37 0.008
At5g44700.1 68418.m05477 leucine-rich repeat transmembrane prote... 30 1.3
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 29 1.7
At5g52530.2 68418.m06518 dentin sialophosphoprotein-related cont... 28 3.8
At5g52530.1 68418.m06517 dentin sialophosphoprotein-related cont... 28 3.8
At4g11120.1 68417.m01804 translation elongation factor Ts (EF-Ts... 28 5.1
At5g56930.1 68418.m07107 zinc finger (CCCH-type) family protein ... 27 6.7
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 27 6.7
At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate dehydro... 27 8.9
At5g01590.1 68418.m00074 expressed protein 27 8.9
At3g06430.1 68416.m00741 pentatricopeptide (PPR) repeat-containi... 27 8.9
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/81 (37%), Positives = 41/81 (50%)
Frame = +1
Query: 331 MVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYND 510
+V AL DL + ++E+ + EV L N ++ L L W PE I ++
Sbjct: 52 IVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSE 111
Query: 511 PYGVVLVIGAWNYPLQLLLLP 573
P GVVLVI AWNYP L + P
Sbjct: 112 PLGVVLVISAWNYPFLLSIDP 132
Score = 31.1 bits (67), Expect = 0.55
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 195 QKTMSAAEA---VQKARDTFNRGTTRPIEWRRQQLKNLL 302
+K +AEA V + R +F+ G TR EWR QLK L+
Sbjct: 4 KKVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLM 42
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/81 (37%), Positives = 41/81 (50%)
Frame = +1
Query: 331 MVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYND 510
+V AL DL + ++E+ + EV L N ++ L L W PE I ++
Sbjct: 52 IVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSE 111
Query: 511 PYGVVLVIGAWNYPLQLLLLP 573
P GVVLVI AWNYP L + P
Sbjct: 112 PLGVVLVISAWNYPFLLSIDP 132
Score = 31.1 bits (67), Expect = 0.55
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 195 QKTMSAAEA---VQKARDTFNRGTTRPIEWRRQQLKNLL 302
+K +AEA V + R +F+ G TR EWR QLK L+
Sbjct: 4 KKVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLM 42
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEV 495
E + + EAL++DL + ++EA L E+ + + L W PE
Sbjct: 110 EKEKCITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSA 169
Query: 496 VIYNDPYGVVLVIGAWNYPLQLLLLP 573
I ++P GVVLVI AWN+P L + P
Sbjct: 170 QIVSEPLGVVLVISAWNFPFLLSVEP 195
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 210 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYERKPK 326
AA V + R FN G T+ EWR QL+N+ RM + K K
Sbjct: 75 AALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEK 113
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEV 495
E + + EAL++DL + ++EA L E+ + + L W PE
Sbjct: 110 EKEKCITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSA 169
Query: 496 VIYNDPYGVVLVIGAWNYPLQLLLLP 573
I ++P GVVLVI AWN+P L + P
Sbjct: 170 QIVSEPLGVVLVISAWNFPFLLSVEP 195
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 210 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYERKPK 326
AA V + R FN G T+ EWR QL+N+ RM + K K
Sbjct: 75 AALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEK 113
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/90 (28%), Positives = 48/90 (53%)
Frame = +1
Query: 304 ECTSENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNI 483
E +N++ + AL +DL + EA E+ ++ ++ LD+W P+H +
Sbjct: 39 EMVKDNEDKICNALFQDLGKHSTEAFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFY 98
Query: 484 LDEVVIYNDPYGVVLVIGAWNYPLQLLLLP 573
+ + ++PYG VLV+ +WN+P+ L L P
Sbjct: 99 PAKGKVISEPYGTVLVLSSWNFPISLSLDP 128
Score = 30.7 bits (66), Expect = 0.72
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 216 EAVQKARDTFNRGTTRPIEWRRQQLKNLLRM 308
E++++ R+TF G TR ++WR+ Q+ + M
Sbjct: 10 ESLREMRETFASGRTRSLKWRKAQIGAIYEM 40
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEV 495
E+Q ++ E +D ++ ++A L E+ + L + W KPE G +
Sbjct: 123 EHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVS 182
Query: 496 VIYNDPYGVVLVIGAWNYPLQLLLLP 573
+ P GV+ I WNYP + P
Sbjct: 183 RVEFHPLGVIGAIVPWNYPFHNIFNP 208
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 316 ENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEV 495
E+Q ++ E +D ++ ++A L E+ + L + W KPE G +
Sbjct: 123 EHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVS 182
Query: 496 VIYNDPYGVVLVIGAWNYPLQLLLLP 573
+ P GV+ I WNYP + P
Sbjct: 183 RVEFHPLGVIGAIVPWNYPFHNIFNP 208
>At5g44700.1 68418.m05477 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1252
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 561 QLQGIVPGAYYEDDSVRVIVY--NHLV*NVHEAFWRMFRLSPLI 436
QLQG++P E +++ + N+L +HE FWRM +L L+
Sbjct: 275 QLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLV 318
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 252 GTTRPIEWRRQQLKNLLRMYERKPKRHGGG 341
G + E R + N L+MY+ +PKR+ GG
Sbjct: 25 GKKKTTETRSKSTVNRLKMYKTRPKRNAGG 54
>At5g52530.2 68418.m06518 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 198 KTMSAAEAVQKAR-DTFNRGTTRPIEWRRQQLKNLLRMYERKPKR 329
K + + +A+Q+ R DT+ +T P + R+ ++ +RM R P+R
Sbjct: 488 KEVPSHDAIQRRRPDTYEEVSTGPDRFARRDDRSGMRMRNRSPQR 532
>At5g52530.1 68418.m06517 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 198 KTMSAAEAVQKAR-DTFNRGTTRPIEWRRQQLKNLLRMYERKPKR 329
K + + +A+Q+ R DT+ +T P + R+ ++ +RM R P+R
Sbjct: 488 KEVPSHDAIQRRRPDTYEEVSTGPDRFARRDDRSGMRMRNRSPQR 532
>At4g11120.1 68417.m01804 translation elongation factor Ts (EF-Ts),
putative similar to ethylene-responsive elongation
factor EF-Ts precursor [Lycopersicon esculentum]
GI:5669636; contains Pfam profile PF00889: Elongation
factor TS
Length = 395
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 304 ECTSENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPP 465
E T +NQ + + + LR+ E L+E +++ND N +D +K P
Sbjct: 313 ESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDNLSKEVGSP 366
>At5g56930.1 68418.m07107 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 675
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Frame = +3
Query: 24 TEPHVPNSDVHVID-IDME----VENIIENPHVS--IQIDKVRGSNKSE 149
T+ VP S V++ + +D+ V+N++E P+++ +Q+D V K+E
Sbjct: 131 TQDSVPESCVNLFEALDVNDYDIVQNVLEKPNIATQVQVDPVESEKKAE 179
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 499 IYNDPYGVVLVIGAWNYPL 555
I +P GVV +I WNYPL
Sbjct: 147 ILKEPIGVVGMITPWNYPL 165
>At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate
dehydrogenase (P5CDH) identical to
delta-1-pyrroline-5-carboxylate dehydrogenase precursor
[Arabidopsis thaliana] gi|15383744|gb|AAK73756;
identical to cDNA delta-1-pyrroline-5-carboxylate
dehydrogenase precursor (P5CDH) nuclear gene for
mitochondrial product GI:15383743; contains Pfam profile
PF00171:aldehyde dehydrogenase (NAD) family protein
Length = 556
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 502 YNDPYGVVLVIGAWNYPLQLLLL 570
Y PYG V ++ +N+PL++ LL
Sbjct: 193 YRWPYGPVTIVTPFNFPLEIPLL 215
>At5g01590.1 68418.m00074 expressed protein
Length = 424
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 474 EAFWRMFRLSPLIQIMQSVPQIIDQVVDFE 385
+ +W FR SP++Q M +I D + E
Sbjct: 115 QKWWESFRASPVVQFMTRAEEIADDMNKME 144
>At3g06430.1 68416.m00741 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 486
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 GTTRPIEWRRQQLKNLLRMYERKPKRHG 335
G T P+ RR +KN+ + +R+ K +G
Sbjct: 59 GITEPVNQRRTPIKNVKKKLDRRSKANG 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,485,028
Number of Sequences: 28952
Number of extensions: 253867
Number of successful extensions: 809
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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