Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0547
         (529 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q619L8 Cluster: Putative uncharacterized protein CBG142...    32   7.1  
UniRef50_A4H5D6 Cluster: Putative uncharacterized protein; n=1; ...    32   7.1  
UniRef50_Q5KE53 Cluster: Putative uncharacterized protein; n=1; ...    32   7.1  
UniRef50_UPI00004DA174 Cluster: Platelet glycoprotein Ib alpha c...    32   9.4  
UniRef50_Q91ES6 Cluster: ORF129; n=1; Cydia pomonella granulovir...    32   9.4  

>UniRef50_Q619L8 Cluster: Putative uncharacterized protein CBG14222;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG14222 - Caenorhabditis
           briggsae
          Length = 614

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 283 DYPTLNRHRRR-RWQLNYGYDYQPPRHYTERRDYYQNQQDLIPQIFRLLDELAVEVR 450
           + P L+R+RR+ R ++    DY+  RHY  RR +   ++ L+ ++    D+   + R
Sbjct: 179 ELPVLSRNRRKLRERVGKYDDYEEDRHYRRRRPFAMRRRALLQRLEDYYDDYEYDFR 235


>UniRef50_A4H5D6 Cluster: Putative uncharacterized protein; n=1;
           Leishmania braziliensis|Rep: Putative uncharacterized
           protein - Leishmania braziliensis
          Length = 2087

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 407 LRYLDCLTSSLLR*GGSHLRPHHRSQFTFHTQCPITC 517
           L  +D LT + +R G    +PHH S  T    CP +C
Sbjct: 282 LACIDALTPASVRNGDGGSKPHHTSAHTHAPVCPFSC 318


>UniRef50_Q5KE53 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 179

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -1

Query: 337 IRNLVAISSYGVCLGSGNLFLS*SRFVRHHLQNFQSLFCRHNAVR*QPL*AAGTQE 170
           +RN + ++  G+    GN+ +    FVRHH  N  +   R + +R Q L  A T E
Sbjct: 4   LRNCMGLAKIGIVDAYGNVLME--SFVRHHPANVVNYVTRKSGIRPQDLVGAPTYE 57


>UniRef50_UPI00004DA174 Cluster: Platelet glycoprotein Ib alpha
           chain precursor (Glycoprotein Ibalpha) (GP-Ib alpha)
           (GPIbA) (GPIb-alpha) (CD42B-alpha) (CD42B) [Contains:
           Glycocalicin].; n=1; Xenopus tropicalis|Rep: Platelet
           glycoprotein Ib alpha chain precursor (Glycoprotein
           Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha)
           (CD42B-alpha) (CD42B) [Contains: Glycocalicin]. -
           Xenopus tropicalis
          Length = 613

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 343 NHIRNLVAISSYGVCLGSGNLFLS*SRFVRHHLQNFQSLFCRHNAV 206
           +HI NL  +++    + S N   S      HHL+N Q L+ +HN +
Sbjct: 107 DHIPNLSLLTNLNKLILSHNRITSVPDAAFHHLKNLQQLYLQHNGI 152


>UniRef50_Q91ES6 Cluster: ORF129; n=1; Cydia pomonella
           granulovirus|Rep: ORF129 - Cydia pomonella granulosis
           virus (CpGV) (Cydia pomonellagranulovirus)
          Length = 128

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 121 IFVRNSTRSKMNKFTLVLGFLLLIAVVN 204
           +FV N+ R K NK+  VL FLL   +VN
Sbjct: 100 LFVNNACREKYNKYLFVLVFLLCAQIVN 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,185,183
Number of Sequences: 1657284
Number of extensions: 7724690
Number of successful extensions: 16668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16645
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)