Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0547
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.9  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 346 QPPRHYTERRDYYQNQQDLIP 408
           Q  R+Y    D YQ+ Q L+P
Sbjct: 172 QENRYYNNSPDQYQSYQILLP 192


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 491 FHTQCPITCLNTF 529
           F TQCPI   NTF
Sbjct: 217 FVTQCPIQQGNTF 229


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 491 FHTQCPITCLNTF 529
           F TQCPI   NTF
Sbjct: 217 FVTQCPIQQGNTF 229


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 458 HLRPHHRSQFTFHTQCPITCLN 523
           HLR H  S+     +C  TC+N
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVN 270


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 458 HLRPHHRSQFTFHTQCPITCLN 523
           HLR H  S+     +C  TC+N
Sbjct: 7   HLRNHAGSKPFQCNKCDYTCVN 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,232
Number of Sequences: 336
Number of extensions: 1864
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)