Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0546
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   3.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   6.1  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   8.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 473 LIAPGIKAQYFRPLLLGISTHSLSGQW 393
           ++APGI +   + L+L +S + L+ +W
Sbjct: 296 VLAPGIFSDLKQLLVLDLSNNELTSEW 322


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 394 HCPLSEWVEMPSNNGLKYCALIPGAIRGALQMV 492
           H P+++ VE  S +G     L+   I   +QMV
Sbjct: 230 HMPIADLVEQTSGSGSGLPLLVQRTIAKQIQMV 262


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -2

Query: 243 LYQSNAHV----VSDSLKMFVYIFSVFCFFQHLRH 151
           L+Q   HV    VS   +M  Y       F+HLRH
Sbjct: 117 LFQIGQHVRGVLVSIKSRMMAYTNDAVAKFEHLRH 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,473
Number of Sequences: 2352
Number of extensions: 10680
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)