Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0546
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-4|CAA80133.1| 181|Caenorhabditis elegans Hypothetical pr... 121 3e-28
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 29 1.5
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 2.0
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 2.0
Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GA... 29 2.6
Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical p... 28 4.5
Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z50016-7|CAE52900.1| 90|Caenorhabditis elegans Hypothetical pr... 27 6.0
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 27 7.9
U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine rece... 27 7.9
>Z22176-4|CAA80133.1| 181|Caenorhabditis elegans Hypothetical
protein ZK1098.5 protein.
Length = 181
Score = 121 bits (291), Expect = 3e-28
Identities = 61/140 (43%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +1
Query: 100 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTST-RC 276
D+KK+++EL LTYGA+V++MLK+ E+ +DV L+++G+NMG RL +DFLA+ + RC
Sbjct: 11 DSKKMSAELFCLTYGAMVTEMLKDYEDPKDVTIQLDKMGFNMGTRLADDFLAKNANVPRC 70
Query: 277 LEMRETADKI-QQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPS---NNGLK 444
++ R+ AD + + A YL + T +SW+S EF++ + PL+E V++P+ + GL
Sbjct: 71 VDTRQIADVLCRNAIPCYLGISATASSWTSGDREFTITLEANPLTELVQVPAHLVSAGLS 130
Query: 445 YCALIPGAIRGALQMVQLDV 504
Y LI GAIRGAL+ V V
Sbjct: 131 YSQLIAGAIRGALEAVHFKV 150
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 148 LVSQMLKETENTEDVNKHLERIGYNMGVRLIE 243
L S + ENT D+NK L++I N + L+E
Sbjct: 428 LASDYRRRLENTGDINKILQKISENAYISLVE 459
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 365 ALLQLVTVGCMLRYSLKACCILSAVSLISKQRVDVVRARKSSISLTPMLY 216
ALL L+ VG M +Y+L IL+ SL++ V A + + MLY
Sbjct: 216 ALLILIWVGIMGKYNLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLY 265
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 466 HRESKRNISGRYYLASPPIH*VD-NGPKQAKTHL 368
H+ S++N + YY +SPPI ++ KQ+KT L
Sbjct: 623 HQTSRQNSTENYYSSSPPIFTIEPMSRKQSKTSL 656
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 365 ALLQLVTVGCMLRYSLKACCILSAVSLISKQRVDVVRARKSSISLTPMLY 216
ALL L+ VG M +Y+L IL+ SL++ V A + + MLY
Sbjct: 216 ALLILIWVGIMGKYNLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLY 265
>Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical
protein T21C12.1b protein.
Length = 487
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 428 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 261
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 282 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 340
Query: 260 VRARKSSISLTPM 222
VRARK S LTP+
Sbjct: 341 VRARKESRMLTPL 353
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 428 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 261
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 294 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 352
Query: 260 VRARKSSISLTPM 222
VRARK S LTP+
Sbjct: 353 VRARKESRMLTPL 365
>AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49A protein.
Length = 487
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 428 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 261
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 282 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 340
Query: 260 VRARKSSISLTPM 222
VRARK S LTP+
Sbjct: 341 VRARKESRMLTPL 353
>Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical
protein M01G12.4 protein.
Length = 352
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 73 KMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLI 240
++S S + + + L + G LV +M K TEN + + I YN RL+
Sbjct: 212 QLSSTVSAIISNIIPCLLFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLV 267
>Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical
protein T11F9.2b protein.
Length = 512
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 163 LKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTR 273
L + E TE K + + ++ + L + LART STR
Sbjct: 210 LSDVERTEQQEKEMAELANDLEMALTNNVLARTFSTR 246
>Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical
protein T11F9.2a protein.
Length = 505
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 163 LKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTR 273
L + E TE K + + ++ + L + LART STR
Sbjct: 203 LSDVERTEQQEKEMAELANDLEMALTNNVLARTFSTR 239
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 124 LLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLI 240
L + G LV +M K TEN + + I YN RL+
Sbjct: 296 LFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLV 334
>Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical
protein M02B1.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = -3
Query: 446 YFRPLLLGISTHSLSGQWSQTSENSSPALLQLVTVGCMLRYSLKACCILSAVSLISKQRV 267
YF P+L+G++ H + ++ +N+ AL+ L +VG + SL + S +S+ + +
Sbjct: 184 YFMPVLVGLTAHLIGNRF----DNNRKALVGL-SVGSAVLVSLSMLLMTSGLSIGAFFSL 238
Query: 266 DVVRARKSSISLTPMLYPIL 207
V + ++L M+Y ++
Sbjct: 239 SVCSV-NAIVALQLMIYDLV 257
>Z50016-7|CAE52900.1| 90|Caenorhabditis elegans Hypothetical
protein T21C12.1g protein.
Length = 90
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -3
Query: 311 CCIL--SAVSLISKQRVDVVRARKSSISLTPM 222
C +L +AV ISK R+ +VRARK S LTP+
Sbjct: 10 CSLLEYAAVGYISK-RMKLVRARKESRMLTPL 40
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 58 NTLCYKMSRQTSRLDAKKVNSE 123
+T CYK+ Q +RL AK+ N++
Sbjct: 31 STACYKLMHQNTRLFAKRCNTD 52
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 115 NSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIE 243
N+ LL L +VS+ +K ++ +VN H IG+++ LIE
Sbjct: 564 NTTLLLLNQKFIVSR-IKHGKDLSNVNMHASDIGFSITSELIE 605
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 115 NSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIE 243
N+ LL L +VS+ +K ++ +VN H IG+++ LIE
Sbjct: 564 NTTLLLLNQKFIVSR-IKHGKDLSNVNMHASDIGFSITSELIE 605
>U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 26 protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 91 SRLDAKKVNSELLTLTYGALVSQMLKETEN 180
S + +K+N LT TYG L S M + +EN
Sbjct: 307 STISRRKINIAKLTSTYGDLDSHMKRLSEN 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,584
Number of Sequences: 27780
Number of extensions: 224765
Number of successful extensions: 779
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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