Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0545
         (360 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   0.48 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   7.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   7.7  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 0.48
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 58  FGLKRVLNPRAEFLQPGGS 2
           +G+K  +  + EFL PGGS
Sbjct: 58  YGIKCEIYAKCEFLNPGGS 76


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 274 KR*HIALVLPSIVMYAYYYVTXKISN 351
           +R  + +VLP  V+YA  +VT  + N
Sbjct: 46  RRDPLYIVLPITVIYAVIFVTGLVGN 71


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 165 NNEGT*QTHFKSKLH 121
           NN    Q H  SKLH
Sbjct: 530 NNRNDNQVHHSSKLH 544


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 213 IIYLFYKRLPTYYITKLFTWKTLTYCTRAAIYC 311
           I Y++  R P  Y     TW T+T   R  + C
Sbjct: 53  IYYIYNPRYPLPYSGSKCTW-TITSYHRINLKC 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,418
Number of Sequences: 438
Number of extensions: 1661
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)