Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0544
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 168 VPVPHDIPQAPGKPEENATAVQPTKQNTT 254
           VP P   P    + E    + QPT+ +TT
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTT 424


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 171 PVPHDIPQAPGKPEENATAVQPTKQNTTS 257
           PVP  + +   KP        P++  TT+
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 151  APDCSAGNAMHMASFSKQTNAQDLHFEIKLI 59
            A DC   + + M S  ++ +   LHF +++I
Sbjct: 1402 AQDCDFVDEIEMFSMFERFHVNKLHFLLQII 1432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,003
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)