Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0541
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 404 EQGKKYFIYYTKYFSYRGKNDKFS 475
           + G K   YYT +  YR K  KF+
Sbjct: 84  KDGYKVVCYYTNWSQYRVKIGKFT 107


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 515 FLGTIPTSRCKDFEN 559
           FL  + T RCKD++N
Sbjct: 170 FLRQVFTCRCKDYKN 184


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -3

Query: 514 LGNCFSLPFAIFDTEFIVFSSIAEVLGVVDEIFFSLFM 401
           LG C+ +   I+  E   F    E+LG +D +   + +
Sbjct: 55  LGTCWIIYVRIYCKEIRFFEISFEILGSLDSLILLMVL 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,035
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)