Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0541
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 76 3e-14
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 37 0.015
12_01_1009 - 10253409-10255033,10255301-10255610,10255707-102563... 36 0.026
06_01_0585 - 4200230-4201282 35 0.059
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 35 0.059
08_01_0099 + 709377-709493,710055-710099,710482-710553,712413-71... 33 0.18
10_08_0843 - 20960249-20960446,20960583-20960987,20961092-209612... 32 0.42
03_05_0549 - 25444234-25446792 31 0.73
12_01_1010 - 10280424-10282003,10283359-10283668,10283749-102839... 31 0.96
05_05_0214 + 23319507-23321540 29 2.9
04_03_0572 + 17310729-17310746,17312209-17312902,17312991-173134... 29 2.9
03_05_0075 - 20525996-20526073,20527084-20527170,20527700-205278... 29 2.9
12_01_0389 + 3067808-3069121 29 3.9
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 29 3.9
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 5.1
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 28 5.1
03_05_0081 - 20577619-20577632,20577760-20577998,20578817-205788... 28 5.1
01_06_1183 - 35176780-35177266,35179631-35181093 28 5.1
01_01_0507 - 3704314-3704449,3705038-3705094,3705219-3705297,370... 28 5.1
03_05_0082 - 20595935-20596039,20596103-20596189,20596468-205965... 28 6.8
07_03_0810 - 21674710-21674960,21675318-21675405,21675739-216759... 27 8.9
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 75.8 bits (178), Expect = 3e-14
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +3
Query: 66 RHARNCTAGAVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEG 245
RH++N A +TY EK+K GYGTQ ER+GKDSIK FD C L L+P +P+ +G
Sbjct: 1146 RHSKNNNDLAFFTYEEKRK----LGYGTQRERLGKDSIKPFDACCLCLKPLIHPLCCPKG 1201
Query: 246 YLFDKEAILEYIISKKNAYNR 308
+ F KE ILE ++++K R
Sbjct: 1202 HTFCKECILECLLAQKKDIKR 1222
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 501 KQLPSFWVPSQLPDAKISKIEKPDPTVYCPISGKPLKM 614
+ + +FW+PS P+A +K+E P CP + LK+
Sbjct: 1367 RNMKAFWLPSATPEA-TAKVEAPSTDTICPEGQEKLKL 1403
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 186 FDCCSLTLQPCRNPVVTKEGYLFDKEAILEYI 281
F CC+LT P +PV T +G +FD +I+ YI
Sbjct: 39 FYCCALTFLPFEDPVCTADGSVFDLMSIIPYI 70
>12_01_1009 -
10253409-10255033,10255301-10255610,10255707-10256312,
10256359-10256487
Length = 889
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 144 GTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEY 278
G + E +D + + C +T++ R+PVV + G+ F++EAI +
Sbjct: 78 GEEGEEEEEDGVLSAFLCPITMEVMRDPVVVETGHAFEREAIARW 122
>06_01_0585 - 4200230-4201282
Length = 350
Score = 34.7 bits (76), Expect = 0.059
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 177 IKNFDCCSLTLQPCRNPVVT-KEGYLFDKEAILEYIISKK 293
+ F CC+L+ +P P V + G LF+KEA++E ++ K+
Sbjct: 118 LSRFTCCALSGEPLAAPAVADRLGNLFNKEALVEALLHKR 157
>05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 34.7 bits (76), Expect = 0.059
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 177 IKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 296
+ ++ CC +T + R+PV+T G +++ ILE++ N
Sbjct: 1323 VPDYLCCQITFEIFRDPVITPSGITYERSIILEHLCKVGN 1362
>08_01_0099 +
709377-709493,710055-710099,710482-710553,712413-712484,
712763-712839,713040-713169,713250-713360,713443-713568
Length = 249
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 192 CCSLTLQPCRNPVVTKEGYLFDKEAILEYI 281
CC +TL R+PV+T G +++ IL+++
Sbjct: 177 CCKITLDIFRDPVITPSGITYERAVILDHL 206
>10_08_0843 -
20960249-20960446,20960583-20960987,20961092-20961232,
20961324-20961471,20961742-20961863,20962372-20962412,
20962671-20962839
Length = 407
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 102 TYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEY 278
T ++ A S T + KDSI + C ++ + R P + +G+ ++ EAI+ +
Sbjct: 307 TLLHRRSLTAFSPASTVPSQFDKDSIPSHFICPISQEIMREPCIAADGFTYEAEAIINW 365
>03_05_0549 - 25444234-25446792
Length = 852
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEY 278
C LT Q R+PV + G F++EAIL++
Sbjct: 20 CPLTKQVMRDPVTIETGQTFEREAILKW 47
>12_01_1010 -
10280424-10282003,10283359-10283668,10283749-10283939,
10283967-10284279
Length = 797
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYNRLL 314
C L+ Q R+PV + G F++EAIL++ + RL+
Sbjct: 27 CPLSKQVMRDPVTIESGATFEREAILKWFKDNGSGGRRLV 66
>05_05_0214 + 23319507-23321540
Length = 677
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 296
C ++L R+PVV+ G +D+E+I + S K+
Sbjct: 281 CPISLDLMRDPVVSASGQTYDRESITRWFGSGKS 314
>04_03_0572 +
17310729-17310746,17312209-17312902,17312991-17313400,
17325755-17326063
Length = 476
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 141 YGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYIISK 290
Y T +VG DS K C + P R P +T +G + + +L + S+
Sbjct: 143 YHTIPFKVGTDSAKALRCRRRAIAPNRKPKITVDGAMEARFVLLRKVCSR 192
>03_05_0075 -
20525996-20526073,20527084-20527170,20527700-20527818,
20527983-20528221,20528324-20528380,20528506-20529131
Length = 401
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 514 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 600
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 74 IFAYAANFPIQKFLQAQSIVAPSAYTSAA 102
>12_01_0389 + 3067808-3069121
Length = 437
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEYI 281
C ++LQP ++PV + G +D+ AI ++
Sbjct: 11 CPISLQPMQDPVTSPTGISYDRRAIHRWL 39
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 216 CRNPVVTKEGYLFDKEAILEYIISKKNAYNRLLK 317
CR+ +V + ++ A L+Y+++KK+A RLL+
Sbjct: 535 CRSYLVGAKVIIYTNHAALKYLLTKKDAKPRLLR 568
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 393 IKFMNREKNISSTTPSTSAIEEKTINSVSNIAN 491
+K + R K I ++ PS +EEK ++ V +AN
Sbjct: 263 LKLLPRSKPIEASEPSPVYVEEKQVHQVPVVAN 295
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEY 278
C LT + +PV T+ G +D++AI EY
Sbjct: 169 CPLTNKVMVDPVTTESGVTYDRKAIEEY 196
>03_05_0081 -
20577619-20577632,20577760-20577998,20578817-20578873,
20579001-20579632,20582728-20583105
Length = 439
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 514 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 600
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 202 IFAYAANFPIQKFLQAQSIVAPSAYISAA 230
>01_06_1183 - 35176780-35177266,35179631-35181093
Length = 649
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 195 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 296
C ++L R+PVV G +D+E+I + S K+
Sbjct: 280 CPISLDLMRDPVVVASGQTYDRESIDRWFSSGKS 313
>01_01_0507 -
3704314-3704449,3705038-3705094,3705219-3705297,
3705380-3705486,3705833-3705949,3706077-3706165,
3706668-3706721,3706800-3706866,3706971-3707128,
3707318-3707386,3707481-3707618,3707706-3707740,
3707829-3707952
Length = 409
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 502 FSLPFAIFDTEFIVFSSIAEVLGVVDE 422
+SLPF ++ T F F A++ G+V+E
Sbjct: 349 YSLPFLLWKTRFPTFVRQAQISGIVEE 375
>03_05_0082 -
20595935-20596039,20596103-20596189,20596468-20596586,
20596686-20596924,20597044-20597100,20597203-20597909,
20599827-20600192
Length = 559
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 514 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 600
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 223 IFAYAANFPIQKFMQAQSIMAPSAYISAA 251
>07_03_0810 -
21674710-21674960,21675318-21675405,21675739-21675990,
21676521-21676685,21677358-21678494
Length = 630
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 508 NCFSLPFAIFDTEFIVFSSIAEVLG-VVDEI 419
N S+PF + + E +V + E LG VVDE+
Sbjct: 160 NASSVPFELLNDEMVVVEQLVEELGVVVDEM 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,319,698
Number of Sequences: 37544
Number of extensions: 255604
Number of successful extensions: 673
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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