Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0541
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2707|AAF48829.1|  307|Drosophila melanogaster CG6179-PA...   230   1e-60

>AE014298-2707|AAF48829.1|  307|Drosophila melanogaster CG6179-PA
           protein.
          Length = 307

 Score =  230 bits (562), Expect = 1e-60
 Identities = 108/200 (54%), Positives = 144/200 (72%), Gaps = 15/200 (7%)
 Frame = +3

Query: 60  MTRHARNCTAGAVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTK 239
           MTRHARNCTAGAVYTY+EKK+DAA SGYGT ++R+GKDS+K+FDCCSLTLQPCR PV+TK
Sbjct: 1   MTRHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITK 60

Query: 240 EGYLFDKEAILEYIISKKNAYNRLLKKYEKQLKKDXXXXXXXXXXXXXXXXIKFMNREK- 416
           +GYLFDKEAIL+YI++KKN Y+R LK+YE+  + +                 +F+N EK 
Sbjct: 61  DGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLSQEANSKQQARMERFVNAEKP 120

Query: 417 --------NISSTTPSTSAI------EEKTINSVSNIANGKEKQLPSFWVPSQLPDAKIS 554
                     +S  PSTS+       E  + +S+SN+ NG EK+LPSFW+PS+ P+A ++
Sbjct: 121 AMTPAHSSAAASEKPSTSSAAAAASSESSSASSISNMTNGHEKKLPSFWLPSECPNAGLA 180

Query: 555 KIEKPDPTVYCPISGKPLKM 614
           K +KPD T+YCP+S KPL++
Sbjct: 181 KAQKPDATIYCPVSQKPLRV 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,155,091
Number of Sequences: 53049
Number of extensions: 446896
Number of successful extensions: 1100
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)