Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0539
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical p...    30   1.2  
AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   3.5  
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    29   3.5  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    29   3.5  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    29   3.5  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    29   3.5  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    28   4.6  
U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protei...    28   6.1  

>Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical
           protein F01D4.5a protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 32  TANGSHEAEYKKRIKSAMSKRTVLNENYKGIVESMSIPAEIHERNGKKYAS 184
           T+N  H++  KKR +    KR   +E Y+   E+ ++  +I+++ G KY S
Sbjct: 9   TSNSVHKSPPKKRRRVKKKKRNEEDEEYE---ENKNMATQINQKFGSKYKS 56


>L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical
           protein C02F5.4 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 56  EYKKRIKSAMSKRTVLNENYKGIVESMSIPAEIHER 163
           EY KR+K+  ++R  L  N   ++E++ +  E HE+
Sbjct: 230 EYVKRLKNETNERETLESNLNMLIENVRMSIEHHEK 265


>AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical
           protein D1007.13a protein.
          Length = 142

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 612 NSPYA*PPAAGSTTFQFCVLSKYPPS 535
           ++ Y+ PPA  STT+   + S YPPS
Sbjct: 23  STAYSPPPATSSTTYGSSIPSTYPPS 48


>AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical
           protein D1007.13b protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 612 NSPYA*PPAAGSTTFQFCVLSKYPPS 535
           ++ Y+ PPA  STT+   + S YPPS
Sbjct: 128 STAYSPPPATSSTTYGSSIPSTYPPS 153


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +2

Query: 152 IHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYV 313
           + + +GK   S G     HCCP   ++   ++T ++    TD    P E L +V
Sbjct: 182 LSKSSGKCPKSNGMCHRGHCCPRLTIDEARKATPYHLNYVTDTQCDPTEPLDFV 235


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 204  YTAARPKSWSDALRARTTTAACSP 275
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 204  YTAARPKSWSDALRARTTTAACSP 275
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 204  YTAARPKSWSDALRARTTTAACSP 275
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 204  YTAARPKSWSDALRARTTTAACSP 275
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 186 WGPYCRYTAARPKSW 230
           W PYC Y A+RP  W
Sbjct: 475 WVPYCDYEASRPLGW 489


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +3

Query: 144 LLKYTRETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPT 278
           +  Y RET +    W P CR        + D  + +     C PT
Sbjct: 180 MFTYNRETLQCDEFWFPGCRTAETNANLFEDYQQCQKIADLCKPT 224


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +3

Query: 144 LLKYTRETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPT 278
           +  Y RET +    W P CR        + D  + +     C PT
Sbjct: 178 MFTYNRETLQCDEFWFPGCRTAETNANLFEDYQQCQKIADLCKPT 222


>U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protein
           protein 64 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 317 LDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESAN 433
           LD+ + E + ++   +I  ++   HL QW+ A  FE  N
Sbjct: 172 LDDQSLEAIKLSNPSQINQLAQITHLNQWKTAKNFELCN 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,158
Number of Sequences: 27780
Number of extensions: 263695
Number of successful extensions: 1035
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)