Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0538
(525 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VA59 Cluster: CG1539-PD, isoform D; n=11; Endopterygo... 61 2e-08
UniRef50_Q4RHQ5 Cluster: Chromosome 19 SCAF15045, whole genome s... 41 0.020
UniRef50_P28289 Cluster: Tropomodulin-1; n=17; Eutheria|Rep: Tro... 38 0.14
UniRef50_UPI0000E46277 Cluster: PREDICTED: similar to Tropomodul... 37 0.25
UniRef50_UPI00005A2BCF Cluster: PREDICTED: similar to leiomodin ... 36 0.57
UniRef50_Q4RJ94 Cluster: Chromosome 18 SCAF15038, whole genome s... 36 0.57
UniRef50_Q3UHZ5 Cluster: 17 days embryo heart cDNA, RIKEN full-l... 36 0.57
UniRef50_Q8WVJ8 Cluster: LMOD2 protein; n=3; Eutheria|Rep: LMOD2... 36 0.57
UniRef50_Q6P5Q4 Cluster: ELMO/CED-12 domain-containing protein 2... 36 0.57
UniRef50_A4D0Y2 Cluster: Leiomodin 2; n=2; Euteleostomi|Rep: Lei... 36 0.57
UniRef50_Q66I90 Cluster: Zgc:103424; n=2; Danio rerio|Rep: Zgc:1... 35 1.00
UniRef50_A7S3Y9 Cluster: Predicted protein; n=7; Eumetazoa|Rep: ... 33 5.3
UniRef50_Q9NZQ9 Cluster: Tropomodulin-4; n=19; Mammalia|Rep: Tro... 33 5.3
UniRef50_A1SAV7 Cluster: Putative uncharacterized protein precur... 32 7.0
UniRef50_Q9JKK7-2 Cluster: Isoform 2 of Q9JKK7 ; n=2; Mammalia|R... 32 9.3
UniRef50_O01479 Cluster: Tropomodulin; n=3; Caenorhabditis|Rep: ... 32 9.3
>UniRef50_Q9VA59 Cluster: CG1539-PD, isoform D; n=11;
Endopterygota|Rep: CG1539-PD, isoform D - Drosophila
melanogaster (Fruit fly)
Length = 439
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/38 (68%), Positives = 35/38 (92%)
Frame = +1
Query: 412 AKLYGRELSTYDEVDVDELLSKLTQEELTMLAKEVDPD 525
AKLYG++LS YD+VDV+ LL++L+ EE+T+LAKEVDPD
Sbjct: 88 AKLYGKDLSEYDDVDVESLLAQLSPEEITILAKEVDPD 125
>UniRef50_Q4RHQ5 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=6; Vertebrata|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 383
Score = 40.7 bits (91), Expect = 0.020
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEV 516
Y RELS Y++VD DELL+ L+ EEL L KE+
Sbjct: 6 YRRELSKYEDVDEDELLASLSPEELAELEKEL 37
>UniRef50_P28289 Cluster: Tropomodulin-1; n=17; Eutheria|Rep:
Tropomodulin-1 - Homo sapiens (Human)
Length = 359
Score = 37.9 bits (84), Expect = 0.14
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y REL Y ++D DE+L LT+EEL L E+D
Sbjct: 3 YRRELEKYRDLDEDEILGALTEEELRTLENELD 35
>UniRef50_UPI0000E46277 Cluster: PREDICTED: similar to Tropomodulin
4 (muscle); n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Tropomodulin 4 (muscle) -
Strongylocentrotus purpuratus
Length = 409
Score = 37.1 bits (82), Expect = 0.25
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 430 ELSTYDEVDVDELLSKLTQEELTMLAKEVDPD 525
+ + Y ++D DE+L LT+E+L LA E+DPD
Sbjct: 7 DYNKYADIDEDEILKNLTEEQLEELAYELDPD 38
>UniRef50_UPI00005A2BCF Cluster: PREDICTED: similar to leiomodin 3
(fetal); n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to leiomodin 3 (fetal) - Canis familiaris
Length = 475
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 6 YRRGLSKYESIDEDELLASLSAEELKELERELE 38
>UniRef50_Q4RJ94 Cluster: Chromosome 18 SCAF15038, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 18 SCAF15038, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 384
Score = 35.9 bits (79), Expect = 0.57
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Frame = +1
Query: 427 RELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
+E+ Y ++D DELL KL++EEL L +E+DPD
Sbjct: 2 KEMEKYRDIDEDELLKKLSEEELQRLEDELEELDPD 37
>UniRef50_Q3UHZ5 Cluster: 17 days embryo heart cDNA, RIKEN
full-length enriched library, clone:I920184N14
product:leiomodin 2 (cardiac), full insert sequence;
n=16; Tetrapoda|Rep: 17 days embryo heart cDNA, RIKEN
full-length enriched library, clone:I920184N14
product:leiomodin 2 (cardiac), full insert sequence -
Mus musculus (Mouse)
Length = 550
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 6 YRRGLSKYESIDEDELLASLSPEELKELERELE 38
>UniRef50_Q8WVJ8 Cluster: LMOD2 protein; n=3; Eutheria|Rep: LMOD2
protein - Homo sapiens (Human)
Length = 170
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 38 YRRGLSKYESIDEDELLASLSAEELKELERELE 70
>UniRef50_Q6P5Q4 Cluster: ELMO/CED-12 domain-containing protein 2;
n=2; Homo sapiens|Rep: ELMO/CED-12 domain-containing
protein 2 - Homo sapiens (Human)
Length = 218
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 40 YRRGLSKYESIDEDELLASLSAEELKELERELE 72
>UniRef50_A4D0Y2 Cluster: Leiomodin 2; n=2; Euteleostomi|Rep:
Leiomodin 2 - Homo sapiens (Human)
Length = 523
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 6 YRRGLSKYESIDEDELLASLSAEELKELERELE 38
>UniRef50_Q66I90 Cluster: Zgc:103424; n=2; Danio rerio|Rep:
Zgc:103424 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 263
Score = 35.1 bits (77), Expect = 1.00
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAK---EVDPD 525
Y R L ++E++ DELL+ LT EEL L K E++PD
Sbjct: 6 YRRGLGKHEEIEEDELLASLTSEELQELEKIMAEMEPD 43
>UniRef50_A7S3Y9 Cluster: Predicted protein; n=7; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 575
Score = 32.7 bits (71), Expect = 5.3
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 293 RKKMGKKRW--WSLSRPSPQPLQGP 361
RK GKK W WS+SRP+P P+ P
Sbjct: 542 RKCTGKKVWYEWSVSRPAPVPIHNP 566
>UniRef50_Q9NZQ9 Cluster: Tropomodulin-4; n=19; Mammalia|Rep:
Tropomodulin-4 - Homo sapiens (Human)
Length = 345
Score = 32.7 bits (71), Expect = 5.3
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>UniRef50_A1SAV7 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella amazonensis SB2B|Rep:
Putative uncharacterized protein precursor - Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B)
Length = 483
Score = 32.3 bits (70), Expect = 7.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 336 HHHNHYKDPNYPKIILNKDYN--YDDPGQIVRAGVVYIRRSGRGRAPVQAHSR-RTDH 500
HHH+HY+ P P+ +++ DPG R GV Y R R V SR DH
Sbjct: 246 HHHHHYRRPPEPRYAISQGAQRWRHDPGH--RHGVAYRSADVRQRFNVSTPSRIERDH 301
>UniRef50_Q9JKK7-2 Cluster: Isoform 2 of Q9JKK7 ; n=2; Mammalia|Rep:
Isoform 2 of Q9JKK7 - Mus musculus (Mouse)
Length = 240
Score = 31.9 bits (69), Expect = 9.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
+ + L Y +D DELL KL++EEL L +D
Sbjct: 5 FQKGLEKYKNIDEDELLGKLSEEELKQLENVLD 37
>UniRef50_O01479 Cluster: Tropomodulin; n=3; Caenorhabditis|Rep:
Tropomodulin - Caenorhabditis elegans
Length = 392
Score = 31.9 bits (69), Expect = 9.3
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 412 AKLYGRELSTYDEVDVDELLSKLTQEELTMLAKEVDPD 525
+K+Y + L ++ D++ LLS L+ +EL L + DPD
Sbjct: 30 SKVYNKGLKDLEDNDIEGLLSSLSIDELEDLNNDFDPD 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,574,973
Number of Sequences: 1657284
Number of extensions: 8324304
Number of successful extensions: 22119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22078
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -