Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0538
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    27   0.51 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   1.6  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   4.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.3  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 202  RHIH*NFHV*GTSSISRFFFNSIYMS*FGTEVIALKCTMVT*FCEHQIFAC 50
            RH   NFH+    S   FF + +    F      ++CT V    EH +F C
Sbjct: 932  RHGEVNFHLSQVLSGHGFFRDDLCRMGFTPSPDCIRCTGVPETAEHAMFEC 982


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 336 HHHNHYKDPNYPKIILNKD 392
           HHH+H+++PN   +  N D
Sbjct: 659 HHHHHHQNPNDHFVNTNTD 677


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  IWCSQNQVTIVHFNAMTSVPNYDI 131
           + CS N + I +  A  SVP Y++
Sbjct: 117 VQCSHNCIYIPYGGAEVSVPTYEV 140


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 89   NGHLILRTPN 60
            NGHLILRT N
Sbjct: 1051 NGHLILRTTN 1060


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,758
Number of Sequences: 2352
Number of extensions: 9666
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)