Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0538
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein. 38 0.022
AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein. 38 0.022
AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomoduli... 38 0.022
BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein. 36 0.066
BC062765-1|AAH62765.1| 218|Homo sapiens LMOD2 protein protein. 36 0.087
BC017911-1|AAH17911.1| 170|Homo sapiens LMOD2 protein protein. 36 0.087
BC064961-1|AAH64961.1| 351|Homo sapiens tropomodulin 2 (neurona... 35 0.20
AF177169-1|AAF31668.1| 351|Homo sapiens tropomodulin 2 protein. 35 0.20
BC017810-1|AAH17810.1| 345|Homo sapiens tropomodulin 4 (muscle)... 33 0.81
AL592424-10|CAI16384.1| 142|Homo sapiens tropomodulin 4 (muscle... 33 0.81
AL592424-9|CAI16383.1| 345|Homo sapiens tropomodulin 4 (muscle)... 33 0.81
AF393375-1|AAM73676.1| 345|Homo sapiens tropomodulin 4 protein. 33 0.81
AF321183-1|AAK06765.1| 345|Homo sapiens muscle tropomodulin pro... 33 0.81
AF177173-1|AAF31672.1| 345|Homo sapiens tropomodulin 4 protein. 33 0.81
AF165217-1|AAF01277.1| 345|Homo sapiens Sk-tropomodulin protein. 33 0.81
BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth mus... 29 10.0
AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth mus... 29 10.0
>M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.022
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y REL Y ++D DE+L LT+EEL L E+D
Sbjct: 3 YRRELEKYRDLDEDEILGALTEEELRTLENELD 35
>AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.022
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y REL Y ++D DE+L LT+EEL L E+D
Sbjct: 3 YRRELEKYRDLDEDEILGALTEEELRTLENELD 35
>AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomodulin
protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.022
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y REL Y ++D DE+L LT+EEL L E+D
Sbjct: 3 YRRELEKYRDLDEDEILGALTEEELRTLENELD 35
>BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 36.3 bits (80), Expect = 0.066
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y REL Y ++D D++L LT+EEL L E+D
Sbjct: 3 YRRELEKYRDLDEDKILGALTEEELRTLENELD 35
>BC062765-1|AAH62765.1| 218|Homo sapiens LMOD2 protein protein.
Length = 218
Score = 35.9 bits (79), Expect = 0.087
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 40 YRRGLSKYESIDEDELLASLSAEELKELERELE 72
>BC017911-1|AAH17911.1| 170|Homo sapiens LMOD2 protein protein.
Length = 170
Score = 35.9 bits (79), Expect = 0.087
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
Y R LS Y+ +D DELL+ L+ EEL L +E++
Sbjct: 38 YRRGLSKYESIDEDELLASLSAEELKELERELE 70
>BC064961-1|AAH64961.1| 351|Homo sapiens tropomodulin 2 (neuronal)
protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.20
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
+ +EL Y +D DELL KL++EEL L +D
Sbjct: 5 FQKELEKYKNIDEDELLGKLSEEELKQLENVLD 37
>AF177169-1|AAF31668.1| 351|Homo sapiens tropomodulin 2 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.20
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKEVD 519
+ +EL Y +D DELL KL++EEL L +D
Sbjct: 5 FQKELEKYKNIDEDELLGKLSEEELKQLENVLD 37
>BC017810-1|AAH17810.1| 345|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AL592424-10|CAI16384.1| 142|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AL592424-9|CAI16383.1| 345|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AF393375-1|AAM73676.1| 345|Homo sapiens tropomodulin 4 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AF321183-1|AAK06765.1| 345|Homo sapiens muscle tropomodulin
protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AF177173-1|AAF31672.1| 345|Homo sapiens tropomodulin 4 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>AF165217-1|AAF01277.1| 345|Homo sapiens Sk-tropomodulin protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.81
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTML---AKEVDPD 525
Y +EL Y ++D DE+L L+ EEL L +E+DP+
Sbjct: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPE 41
>BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 600
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKE---VDPD 525
Y R++S ++ D+D LL L+ EE+ L KE VDPD
Sbjct: 7 YRRQVS--EDPDIDSLLETLSPEEMEELEKELDVVDPD 42
>AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 631
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 421 YGRELSTYDEVDVDELLSKLTQEELTMLAKE---VDPD 525
Y R++S ++ D+D LL L+ EE+ L KE VDPD
Sbjct: 7 YRRQVS--EDPDIDSLLETLSPEEMEELEKELDVVDPD 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,624,919
Number of Sequences: 237096
Number of extensions: 1265836
Number of successful extensions: 2819
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2814
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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