Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0537
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 38  GLHRPHRDHVRSKHAADAPEPRLACASIWFFVEV 139
           G+HRP  D+  +K+ + + E  L    + FFV+V
Sbjct: 201 GVHRPGFDNDCNKNTSTSKEIALNNDVLLFFVKV 234


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 62  HVRSKHAADAPEPRLACASIWFFVEVVSI 148
           +V +  A+    P + C  +W   EVV I
Sbjct: 275 YVATGKASFVTVPMIVCPIVWLMDEVVEI 303


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 62  HVRSKHAADAPEPRLACASIWFFVEVVSI 148
           +V +  A+    P + C  +W   EVV I
Sbjct: 275 YVATGKASFVTVPMIVCPIVWLMDEVVEI 303


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 42  STVLTATTYVLNTLQMLLSLASPVPRYGSSSR 137
           STV T TT +  T+      +SP P Y  S++
Sbjct: 308 STVQTPTTVMSPTINCWSLTSSPPPPYQISAQ 339


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 340 AHCDRDNCLDAGRL*WDGEFRRRHDMGRVH 429
           A CD  NC +A RL   G   R+ ++   H
Sbjct: 289 ATCDCPNCQEAERLGPAGVHLRKKNIHSCH 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,743
Number of Sequences: 336
Number of extensions: 2629
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)