Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0537
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542109-1|CAG46906.1| 239|Homo sapiens NET-5 protein. 34 0.46
BC071881-1|AAH71881.1| 239|Homo sapiens tetraspanin 9 protein. 34 0.46
AK223179-1|BAD96899.1| 239|Homo sapiens tetraspan NET-5 variant... 34 0.46
AF089749-1|AAC35859.1| 239|Homo sapiens tetraspan NET-5 protein. 34 0.46
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 31 2.4
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 2.4
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 31 2.4
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 2.4
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 2.4
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 2.4
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 2.4
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 2.4
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 2.4
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 2.4
M60871-1|AAA51951.1| 219|Homo sapiens cell surface antigen prot... 31 3.2
M37033-1|AAA35663.1| 219|Homo sapiens CD53 glycoprotein protein. 31 3.2
BT019643-1|AAV38449.1| 219|Homo sapiens CD53 antigen protein. 31 3.2
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 31 3.2
BC040693-1|AAH40693.1| 219|Homo sapiens CD53 molecule protein. 31 3.2
AL391064-1|CAH73292.1| 219|Homo sapiens CD53 molecule protein. 31 3.2
BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein. 31 4.3
BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein. 31 4.3
AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein. 31 4.3
L25941-1|AAA59495.1| 615|Homo sapiens integral nuclear envelope... 30 7.5
L25931-1|AAA59494.1| 615|Homo sapiens lamin B receptor protein. 30 7.5
BC020079-1|AAH20079.1| 615|Homo sapiens lamin B receptor protein. 30 7.5
AK222834-1|BAD96554.1| 615|Homo sapiens lamin B receptor varian... 30 7.5
AB209514-1|BAD92751.1| 616|Homo sapiens lamin B receptor varian... 30 7.5
>CR542109-1|CAG46906.1| 239|Homo sapiens NET-5 protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.46
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 431 HAQNDHGIESAFGVMEKRLQCCGAMSPRDY--INKRNEFPVSCC 556
H +N+ G+++A+ +++ ++CCG D+ + N P CC
Sbjct: 127 HTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC 170
>BC071881-1|AAH71881.1| 239|Homo sapiens tetraspanin 9 protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.46
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 431 HAQNDHGIESAFGVMEKRLQCCGAMSPRDY--INKRNEFPVSCC 556
H +N+ G+++A+ +++ ++CCG D+ + N P CC
Sbjct: 127 HTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC 170
>AK223179-1|BAD96899.1| 239|Homo sapiens tetraspan NET-5 variant
protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.46
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 431 HAQNDHGIESAFGVMEKRLQCCGAMSPRDY--INKRNEFPVSCC 556
H +N+ G+++A+ +++ ++CCG D+ + N P CC
Sbjct: 127 HTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC 170
>AF089749-1|AAC35859.1| 239|Homo sapiens tetraspan NET-5 protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.46
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 431 HAQNDHGIESAFGVMEKRLQCCGAMSPRDY--INKRNEFPVSCC 556
H +N+ G+++A+ +++ ++CCG D+ + N P CC
Sbjct: 127 HTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC 170
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 861 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 902
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 724 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 765
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 176 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 217
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1828 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1869
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1549 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1590
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISC-RRRNSPSHQSRPASRQLSRS 348
RR+R SR RS+ R +S +R+ SP H+S+ R+ RS
Sbjct: 1874 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1915
>M60871-1|AAA51951.1| 219|Homo sapiens cell surface antigen
protein.
Length = 219
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/112 (22%), Positives = 43/112 (38%)
Frame = +2
Query: 218 VFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTAS 397
VF +V + M A G G+ K +K LL++ I
Sbjct: 55 VFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK--LNE 112
Query: 398 FVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSC 553
+V + D+ +D+ ++A+ ++ LQCCG D+ + P SC
Sbjct: 113 YVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGP---PASC 161
>M37033-1|AAA35663.1| 219|Homo sapiens CD53 glycoprotein protein.
Length = 219
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/112 (22%), Positives = 43/112 (38%)
Frame = +2
Query: 218 VFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTAS 397
VF +V + M A G G+ K +K LL++ I
Sbjct: 55 VFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK--LNE 112
Query: 398 FVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSC 553
+V + D+ +D+ ++A+ ++ LQCCG D+ + P SC
Sbjct: 113 YVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGP---PASC 161
>BT019643-1|AAV38449.1| 219|Homo sapiens CD53 antigen protein.
Length = 219
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/112 (22%), Positives = 43/112 (38%)
Frame = +2
Query: 218 VFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTAS 397
VF +V + M A G G+ K +K LL++ I
Sbjct: 55 VFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK--LNE 112
Query: 398 FVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSC 553
+V + D+ +D+ ++A+ ++ LQCCG D+ + P SC
Sbjct: 113 YVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGP---PASC 161
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 3.2
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 467 RKRTLSRGRSERG*TRPISCRRRNSPSH-QSRPASRQLSRS 348
R R SRGR R +R SCR R S S SR SR RS
Sbjct: 429 RSRDRSRGRGSRSRSRSRSCRSRRSRSQSSSRSRSRGRRRS 469
>BC040693-1|AAH40693.1| 219|Homo sapiens CD53 molecule protein.
Length = 219
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/112 (22%), Positives = 43/112 (38%)
Frame = +2
Query: 218 VFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTAS 397
VF +V + M A G G+ K +K LL++ I
Sbjct: 55 VFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK--LNE 112
Query: 398 FVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSC 553
+V + D+ +D+ ++A+ ++ LQCCG D+ + P SC
Sbjct: 113 YVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGP---PASC 161
>AL391064-1|CAH73292.1| 219|Homo sapiens CD53 molecule protein.
Length = 219
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/112 (22%), Positives = 43/112 (38%)
Frame = +2
Query: 218 VFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTAS 397
VF +V + M A G G+ K +K LL++ I
Sbjct: 55 VFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK--LNE 112
Query: 398 FVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSC 553
+V + D+ +D+ ++A+ ++ LQCCG D+ + P SC
Sbjct: 113 YVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGP---PASC 161
>BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein.
Length = 391
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 287 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 329
>BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein.
Length = 402
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 288 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
>AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein.
Length = 383
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 RRKRTLSRGRSERG*TRPISCRRRNSPSHQ-SRPASRQLSRSQ 345
R++RT S+ R +R R S R S SHQ SR +SR SR +
Sbjct: 279 RKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 321
>L25941-1|AAA59495.1| 615|Homo sapiens integral nuclear envelope
inner membrane protein protein.
Length = 615
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 482 SSP*RRKRTLSRGRSERG*TRPISCRRRNSPSHQS 378
SSP RR+ + SR RS P S RR S SHQ+
Sbjct: 70 SSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQA 104
>L25931-1|AAA59494.1| 615|Homo sapiens lamin B receptor protein.
Length = 615
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 482 SSP*RRKRTLSRGRSERG*TRPISCRRRNSPSHQS 378
SSP RR+ + SR RS P S RR S SHQ+
Sbjct: 70 SSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQA 104
>BC020079-1|AAH20079.1| 615|Homo sapiens lamin B receptor protein.
Length = 615
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 482 SSP*RRKRTLSRGRSERG*TRPISCRRRNSPSHQS 378
SSP RR+ + SR RS P S RR S SHQ+
Sbjct: 70 SSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQA 104
>AK222834-1|BAD96554.1| 615|Homo sapiens lamin B receptor variant
protein.
Length = 615
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 482 SSP*RRKRTLSRGRSERG*TRPISCRRRNSPSHQS 378
SSP RR+ + SR RS P S RR S SHQ+
Sbjct: 70 SSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQA 104
>AB209514-1|BAD92751.1| 616|Homo sapiens lamin B receptor variant
protein.
Length = 616
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 482 SSP*RRKRTLSRGRSERG*TRPISCRRRNSPSHQS 378
SSP RR+ + SR RS P S RR S SHQ+
Sbjct: 71 SSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQA 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,856,678
Number of Sequences: 237096
Number of extensions: 1643796
Number of successful extensions: 3941
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3922
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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