Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0537
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    35   0.053
U41746-1|AAA83330.3|  347|Caenorhabditis elegans Seven tm recept...    31   0.86 
Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL021487-1|CAA16352.4|  241|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    28   6.1  
L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 34.7 bits (76), Expect = 0.053
 Identities = 24/117 (20%), Positives = 42/117 (35%)
 Frame = +2

Query: 206 AIPWVFCVVALMAMFTACCGFAGASKRSKGLLVTHIIFQXXXXXXXXXXXXXXXTLADSD 385
           A P +  V+  +       G  GA + +  L V+  +                  L DS 
Sbjct: 51  ATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSF 110

Query: 386 GTASFVGDTIWDAFIHAQNDHGIESAFGVMEKRLQCCGAMSPRDYINKRNEFPVSCC 556
                +G+ +    +      G+ESA+    +  +CCG  +  D++      P SCC
Sbjct: 111 RLG--IGNQLQTGMVRYHESRGVESAWDKTHQLFECCGVTNSSDWLT-FTTIPDSCC 164


>U41746-1|AAA83330.3|  347|Caenorhabditis elegans Seven tm receptor
           protein 177 protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 179 LDYNVYWPQAIPWVFCVVALMAMFTACCGFAGASKRSKGLLVT 307
           +D+  +W  AI W+  + + + +F   CG+    K +KGL V+
Sbjct: 198 MDWTAFWAMAIVWLLIMSSAVTVF--ICGYGCYKKITKGLEVS 238


>Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical
           protein C17H1.14 protein.
          Length = 396

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +1

Query: 388 DGEFRRRHDMGRVHPRS---ERPRDRVRFRRHGEETAMLRRYEPSRLHQQE 531
           DGE RRR D  R   R+   +R RD     R  EE    R+Y+  R  +QE
Sbjct: 8   DGEQRRREDRARAQIRADQEQRRRDLEESERRAEEER--RQYDRERRREQE 56


>Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical
           protein F53B2.2 protein.
          Length = 230

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 2/151 (1%)
 Frame = +2

Query: 116 SIWFFVEVVSITSLRNTNHYLLDYNVYWPQAIPWVFCVVALMAMFTACCGFAGASKRSKG 295
           SIW  +    +T  R +  Y     VY   +I    C+V L       CG       SK 
Sbjct: 32  SIWMILHQFEVTVARTSLFY-----VYRTISIMIGGCMVVL-----GLCGCFAVCFGSKT 81

Query: 296 LLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTA-SFVGDTIWDAFIHAQNDHGIESAFGV 472
            L  H++                  LA+ D     FVG    +   +  N+   ++    
Sbjct: 82  ALSVHLVLVFLVFVVKIVAIVMF--LANKDHLRREFVGVYRDELVANYHNNSRTKNTLDW 139

Query: 473 MEKRLQCCGAMSPRDYINKRNEFPVSC-CDT 562
           +   L+CCGA    D++   N FP SC C T
Sbjct: 140 VHTSLKCCGANGCEDFLPAGN-FPTSCECGT 169


>AL021487-1|CAA16352.4|  241|Caenorhabditis elegans Hypothetical
           protein Y45F10B.1 protein.
          Length = 241

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 3/152 (1%)
 Frame = +2

Query: 116 SIWFFVEVVSITSLRNTNHYLLDY-NVYWPQAIPWVFCVVALMAMFTACCGFAGASKRSK 292
           SIW  +    +T  R +   LL   N+        +  ++    +    CG       SK
Sbjct: 32  SIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTISIMIGGCMVVLGFCGCFAVGFGSK 91

Query: 293 GLLVTHIIFQXXXXXXXXXXXXXXXTLADSDGTA-SFVGDTIWDAFIHAQNDHGIESAFG 469
             L  H++                  LA++D     FVG    +   +  N+   ++   
Sbjct: 92  TALSVHLVLVFIVFVVKIVAIVMF--LANNDHLRREFVGVYRDELVANYHNNSRTKNTLD 149

Query: 470 VMEKRLQCCGAMSPRDYINKRNEFPVSC-CDT 562
            +   L+CCGA    D++   N FP SC C T
Sbjct: 150 WVHTSLKCCGANGCEDFLPAGN-FPTSCECGT 180


>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -3

Query: 488 AVSSP*RRKRTLSRGRSE-----RG*TRPISCRRRNSPSHQSRPASRQLSRSQ 345
           + S P RR R+ SR RS      R  +R  S  R  SP+ ++   SR  SRSQ
Sbjct: 160 SASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQ 212


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -3

Query: 488 AVSSP*RRKRTLSRGRSE-----RG*TRPISCRRRNSPSHQSRPASRQLSRSQ 345
           + S P RR R+ SR RS      R  +R  S  R  SP+ ++   SR  SRSQ
Sbjct: 160 SASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQ 212


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 373 QRQGNYRDHNEQQHRN*LEYNVRHQQSFAALASA 272
           Q+Q NY   ++QQH+    Y+ + QQ F   A+A
Sbjct: 79  QQQQNYMMQHQQQHQQQHHYHQQQQQQFMFNANA 112


>L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical
           protein F44E2.3 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 394 EFRRRHDMGRVHPRSERPRDRVRFRRHGEETAMLRRYEPSRL 519
           E +RR D  R   R    +DR R RRH   ++   + EP +L
Sbjct: 18  ERKRREDRDRDRERKRDRKDRERKRRHRSSSSEGSQAEPHQL 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,969,698
Number of Sequences: 27780
Number of extensions: 245625
Number of successful extensions: 818
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)