Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0536
(513 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 32 0.058
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 29 0.31
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 29 0.31
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 28 0.71
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 28 0.94
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 27 1.2
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 27 1.6
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 27 2.2
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 2.2
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 27 2.2
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 27 2.2
SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|... 26 2.9
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 3.8
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 5.0
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 6.7
SPCC16C4.20c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 6.7
SPCC553.07c |mug40||DinB translesion DNA repair polymerase|Schiz... 25 6.7
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 31.9 bits (69), Expect = 0.058
Identities = 36/136 (26%), Positives = 59/136 (43%)
Frame = +1
Query: 37 KVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSL 216
K+++ I+ I L E L + +GFR GRS L + + KG +
Sbjct: 318 KLVQEILRIVLEAIYEP--LFNTASHGFRPGRSCHSALRSIFTNF------KGCTWWIEG 369
Query: 217 DIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQ 396
DI FD + H L++ L S + + I L+ +T + I G PQ
Sbjct: 370 DIKACFDSIPHDKLIALLSSKIKDQRFIQLIRKALNAGYLT-----ENRYKYDI-VGTPQ 423
Query: 397 GSVLSPTLFILYINDM 444
GS++SP L +Y++ +
Sbjct: 424 GSIVSPILANIYLHQL 439
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.31
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 235 DRVWHRALLSKLPSYGIPEGLCKWIASFLDG 327
D V A S+LP YGI GL W A++ G
Sbjct: 72 DYVLAHAHSSELPRYGIKWGLANWTAAYATG 102
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.31
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 235 DRVWHRALLSKLPSYGIPEGLCKWIASFLDG 327
D V A S+LP YGI GL W A++ G
Sbjct: 72 DYVLAHAHSSELPRYGIKWGLANWTAAYATG 102
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 28.3 bits (60), Expect = 0.71
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 434 IYRMKSVGESTEPCGTPALMV 372
+YR KSV ES EP G P L +
Sbjct: 140 LYREKSVEESDEPSGIPILFI 160
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.9 bits (59), Expect = 0.94
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = -2
Query: 365 SEQSPSTTTVMLRPSKKLAIHLQRPSGIP*DGSFDRSALCQTLSKAFAISRLTARASPLL 186
+ Q S + V L S++ + H +R +G+F +L L+ ISRL+A A+P L
Sbjct: 351 TSQISSLSLVDLAGSERASAHHERRK----EGAFINKSL---LTLGTVISRLSAAANPSL 403
Query: 185 SKASAHL*VRYTR 147
+ S H+ R ++
Sbjct: 404 TSNSGHIPYRESK 416
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 27.5 bits (58), Expect = 1.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 353 PSTTTVMLRPSKKLA--IHLQRPSGIP*DGSFDRSALCQTLSKAFAISRLTARASPLLSK 180
PS+T + PS A +H Q+P D S D +A+ + +RL+ PLLS
Sbjct: 207 PSSTVSSIAPSTLEAGNLHSQQPPKFSVDSSVDDNAITPRKPFSKIPNRLSPSTQPLLSN 266
Query: 179 A 177
+
Sbjct: 267 S 267
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 361 SDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 471
S +T+ + VP+ S FI Y + +LSI + C+
Sbjct: 39 SSRLTVRSAVPEKSAFGSIEFIFYFSVILSILTIACF 75
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 304 WIASFLDGRSITVVVDGDCSDTMTIN-AGVPQGS 402
W SFL G+ +TVV + S+ IN +P GS
Sbjct: 519 WSESFLAGKRLTVVKNQAVSNDDNINMVNIPDGS 552
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 88 RQLISDRQYGF--RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDI 222
RQ R+ GF RH R G + + + + +A + G A AVS DI
Sbjct: 355 RQSRMSRRLGFTLRHMRINGSSVSFYPNPYTDATDIAGNATAVSEDI 401
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 385 GVPQGSVLSPTLFILYINDML 447
G+PQGS+LS L Y+ D++
Sbjct: 703 GIPQGSILSSFLCHFYMEDLI 723
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 310 RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPR 179
R RD R R+ S Y+ P RR RY+ ++ R SPR
Sbjct: 37 RRNYRDERSSRRYEDSQRRDYS-PARRRDRYERHRESVREESPR 79
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 91 QLISDRQYGFRHGR----SAGDLLVYLTHRWAEALESKG 195
QL D +Y +R G S DL+ YLT RW E G
Sbjct: 35 QLNEDGEYIYRTGDLVLGSVDDLISYLTPRWRERFVING 73
>SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 2.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 443 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 357
MSL+Y +SVG T PCG+ + ++ Q
Sbjct: 1 MSLVYLFQSVGILT-PCGSAGAIAYITSQ 28
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 394 QGSVLSPTLFILYINDMLSIDGMHCY 471
+ S L+ +L LY+ D + ID H Y
Sbjct: 502 KSSTLTESLAFLYLEDNMPIDAFHLY 527
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 157 LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 270
+ ++W E ES AL SLD + W + LS+L
Sbjct: 606 IVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSEL 643
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 407 STEPCGTPALMVMVSEQSPSTTTVMLRPSKKLAIHLQRP 291
S++P GTP + SPSTT V + I+ + P
Sbjct: 200 SSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRAP 238
>SPCC16C4.20c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 77
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 13 RHEASLLSKVMER 51
RHEA LLSKV+E+
Sbjct: 53 RHEAQLLSKVLEK 65
>SPCC553.07c |mug40||DinB translesion DNA repair
polymerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 267 LRQKCPMPDPVEGLRDIKAHSKSLALALQ 181
LRQ PM + G+R K SKS LA+Q
Sbjct: 453 LRQSYPMTIRLLGVRATKLVSKSRCLAMQ 481
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,201,571
Number of Sequences: 5004
Number of extensions: 44767
Number of successful extensions: 139
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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