BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0536
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 64 5e-11
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 64 8e-11
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 60 1e-09
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 50 8e-07
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 32 0.24
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 31 0.72
04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230 30 0.95
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545... 30 1.3
03_02_0091 + 5574528-5577254 30 1.3
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 30 1.3
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 29 1.7
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581... 29 1.7
07_03_1528 + 27474973-27475289,27476890-27477073,27477081-274772... 28 3.8
07_01_0087 + 676501-677907 28 3.8
02_05_0525 + 29764176-29764518,29765351-29765679 28 3.8
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 28 5.1
10_08_0412 - 17729765-17730283,17731256-17731726 27 6.7
05_02_0075 - 6359897-6360292,6360463-6360465 27 6.7
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 27 8.8
12_01_0669 + 5693047-5693141,5694222-5694344,5694528-5694630,569... 27 8.8
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 27 8.8
11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893 27 8.8
09_04_0241 + 15962439-15962795,15962809-15963102 27 8.8
07_03_0768 + 21368058-21368624 27 8.8
07_01_1203 - 11464142-11464324,11464422-11464484,11464685-114665... 27 8.8
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 27 8.8
01_05_0674 - 24187820-24188713,24188809-24189204 27 8.8
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 64.5 bits (150), Expect = 5e-11
Identities = 36/113 (31%), Positives = 56/113 (49%)
Frame = +1
Query: 91 QLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 270
+L+SD YGF G++ D + + +SK E + + LD KAFD + H A+LS +
Sbjct: 415 KLVSDNHYGFIKGKTIQDCPAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVM 474
Query: 271 PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 429
G P +W+ S V+++G ++ GV QG LS LF+L
Sbjct: 475 QHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVPLSLLLFVL 527
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 63.7 bits (148), Expect = 8e-11
Identities = 40/113 (35%), Positives = 54/113 (47%)
Frame = +1
Query: 109 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 288
Q GF GR + L+Y T K + L + LD AKAFD V ++L L G P
Sbjct: 6 QTGFLKGRCISENLIYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFP 65
Query: 289 EGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDML 447
+ WI + L V++ G +T G+ QG LSP LFIL + D+L
Sbjct: 66 DNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFIL-VADVL 117
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 59.7 bits (138), Expect = 1e-09
Identities = 41/137 (29%), Positives = 62/137 (45%)
Frame = +1
Query: 37 KVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSL 216
K++ +++ +L + ++I Q GF GR + L+Y T K + + V L
Sbjct: 999 KILSKVLATRLQRVF--LRMIHLDQTGFLKGRCISENLIYATELIQACYRRKCQTIIVKL 1056
Query: 217 DIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQ 396
D KAFD V +L L G PE WI L V+++G + G+ Q
Sbjct: 1057 DFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGLLQ 1116
Query: 397 GSVLSPTLFILYINDML 447
G LS LFIL + D+L
Sbjct: 1117 GDPLSSYLFIL-VADVL 1132
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 50.4 bits (115), Expect = 8e-07
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGD--LLVYLTHRWAEALESKGE 198
++L K+ +++ +L +L D ++S+ Q F GR D L+ Y + +K
Sbjct: 194 NVLYKIASKVLANRLKLFLPD--IVSEFQSAFVPGRLITDSSLVAYECLNTIKKQSNKKP 251
Query: 199 ALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTI 378
A+ +D+ KA+DR+ L L G + + + + ++G+ +DT+
Sbjct: 252 FFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTDTVVP 311
Query: 379 NAGVPQGSVLSPTLFIL 429
+ G+ QG +SP LF+L
Sbjct: 312 SRGIRQGDPISPYLFLL 328
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGD--LLVY-LTHRWAEALESKG 195
+++ KV+ + + +L L+D L+S Q F GR D LL + H + ++
Sbjct: 974 NVVYKVVSKCLVNRLRPILDD--LVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANS 1031
Query: 196 EALAVSLDIAKAFDRVWHRALLSKLPSYG 282
A A LD++KA+DRV R L L G
Sbjct: 1032 AACAYKLDLSKAYDRVDWRFLELALNKLG 1060
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/95 (20%), Positives = 38/95 (40%)
Frame = +1
Query: 187 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 366
S E + ++ D +H + + G+ + L W A +G + +V D +CS
Sbjct: 886 SNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSS 945
Query: 367 TMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 471
T I+ V + P + + + I + C+
Sbjct: 946 TYCISFRVKNAEAVPP---VKELRKTMRIQALRCH 977
>04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230
Length = 362
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 361 SNRRLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPS 224
+++R+++ +A P S C DP+ ++ V Y+ CR PS
Sbjct: 18 TDQRVKKKRAAASPNSEDGYCADPKKLNALIEDIFVCYSLSCREPS 63
>09_06_0032 +
20353789-20353963,20354240-20354340,20354426-20354560,
20354633-20354714,20354829-20354896,20354984-20355073,
20355133-20355257,20355384-20355717,20355841-20355957,
20356058-20356485,20356564-20356813,20356944-20357194,
20357278-20357587
Length = 821
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 1 AAGIRHEASLLSKVMERIINI--QLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWA 174
+A A +L + E I N+ QL + +E + + + FR S GD+ +L RW+
Sbjct: 351 SASCTSHAEILREKDELIKNLEEQLKELMEQKDTVQSQLDNFRKVASDGDINNHLARRWS 410
Query: 175 EALES 189
+ +S
Sbjct: 411 RSSDS 415
>03_02_0091 + 5574528-5577254
Length = 908
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +1
Query: 181 LESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC 360
L++ G+ AV K D + HR L LP G P+ + I L S +++DG
Sbjct: 212 LDAPGDCAAVG----KMQDAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVT 267
Query: 361 SDTMTINAGVP 393
++ GVP
Sbjct: 268 KPVDLVDIGVP 278
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/82 (36%), Positives = 37/82 (45%)
Frame = +1
Query: 205 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 384
A+ LD++KA+DRV L L G + KW S C D I
Sbjct: 235 ALKLDLSKAYDRVDWAFLDGVLQRMGFGDTWRKWTMS--------------CVDICPIR- 279
Query: 385 GVPQGSVLSPTLFILYINDMLS 450
G+ QG LSP LF L+I D LS
Sbjct: 280 GLRQGDPLSPYLF-LFIADGLS 300
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +1
Query: 208 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMT 375
+S+ + R ++LL+ S+ +P WIA+ +D S +VVD D +
Sbjct: 151 LSVHDKEVIGRTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVH 209
Query: 376 INAGVPQGSVLSPTLFILYINDMLSIDG 459
I G+P G + + F L N +L G
Sbjct: 210 IILGLPVGGIEISSNFELGKNKILETFG 237
>01_01_0753 -
5814087-5814344,5814461-5814646,5814847-5815004,
5815082-5815214,5815299-5815489,5815826-5816281,
5816543-5816661,5816729-5816872,5816994-5817065,
5817368-5817500,5817598-5817733
Length = 661
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 265 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 366
KLP + +C W A +L G+S + +VD +
Sbjct: 563 KLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKE 596
>07_03_1528 +
27474973-27475289,27476890-27477073,27477081-27477261,
27477270-27478206,27478384-27479035,27479352-27479798
Length = 905
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -1
Query: 492 IPRAVIRIAM--HAINRQHVIDIQDEKRGGEHRTLWNASVNGHGI 364
IP A++R+++ + + + + D+K GE T++ + V G GI
Sbjct: 297 IPAALVRVSLAGYRLAEHNYFGVDDQKNFGESLTIFYSMVLGQGI 341
>07_01_0087 + 676501-677907
Length = 468
Score = 28.3 bits (60), Expect = 3.8
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSA-GDLLVYLTHRWAEA--LESKGEA 201
+SK++ R N+ L +E L D F G D +VY T L++ G+
Sbjct: 246 MSKILARYDNLHLHPQIE--HLREDGTVVFVDGTCVVADAVVYCTGNTYSYPFLDTDGKV 303
Query: 202 LAVSLDIAKAFDRVWHRALLSKLPSYGIP---------EGLCKWIASFLDGR 330
+ FD V+ AL L GIP E +W+A L GR
Sbjct: 304 TVDDNRVGPLFDHVFPPALAPSLSFVGIPAMVVVPLFNEVQARWVAQVLSGR 355
>02_05_0525 + 29764176-29764518,29765351-29765679
Length = 223
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 172 AEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVV 345
AE + +G AV+ D+ A R RA L+ G E +C+W+A L+ R + +V
Sbjct: 55 AEGVARRGYR-AVTFDMRGA-GRSTGRASLTGSTEVGDVEAVCRWVADNLNPRGVLLV 110
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 221 SRRPSTGSGIGHFCRSYHLTESPRVSASGSLAFWMGG 331
+RR +G G G++C H+ R AS W+ G
Sbjct: 346 ARRVGSGGGGGYYCSVEHVVTEVRALASCDGGIWLVG 382
>10_08_0412 - 17729765-17730283,17731256-17731726
Length = 329
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 229 PSRYQGSQQEPRPCSPRLQPTCE 161
PSRY+ ++Q+ + C+P TC+
Sbjct: 244 PSRYEINKQQVQQCTPSFTATCD 266
>05_02_0075 - 6359897-6360292,6360463-6360465
Length = 132
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 245 GIGHFCRSYHLTESPRVSASGSLAFWMGGASRSL*TAIALIP*PLTLAFH 394
G+GH C +H V A G W R+ +A + PL LAFH
Sbjct: 37 GMGHNCHKHHQGPPVSVPAKGEARRWGPWFGRTRGSAEPPLA-PLILAFH 85
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 414 GGEHRTLWNASVNGHGIRAIAVYNDRDAPPI 322
GGE WNA VNG + +A D PP+
Sbjct: 2 GGEVVRHWNADVNGISLH-VAEQGPADGPPV 31
>12_01_0669 +
5693047-5693141,5694222-5694344,5694528-5694630,
5694793-5695041
Length = 189
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 261 QKCPMPDPVEGLRDIKAHSKSL---ALALQGFSPPVSKVY 151
+K +P+ V R K H SL A+ + GF PP ++V+
Sbjct: 46 KKIELPEDVYVKRFFKKHPDSLYHDAIKISGFDPPPARVF 85
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 253 ALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY 432
A+ S L +GIPEG C I + R ++VD C+ ++ VP L P + +
Sbjct: 155 AIGSGLIYHGIPEGAC--IGLYFINRPEWIIVDHACAAYSFVS--VPLYDTLGPDA-VQF 209
Query: 433 INDMLSIDGMHC 468
I + +++ + C
Sbjct: 210 IVNHATVEAIFC 221
>11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893
Length = 549
Score = 27.1 bits (57), Expect = 8.8
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 121 RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC 300
RH GD L H +A+ LE++ A A SL+ + + L +Y + C
Sbjct: 227 RHSSPTGDATERLAHYFADGLEAR-LAGAASLERRLVASAEERASAMELLEAYQVFMAAC 285
Query: 301 --KWIASFLDGRSITVVVDG 354
KW+A +I +G
Sbjct: 286 CFKWVAFTFANMAILRAAEG 305
>09_04_0241 + 15962439-15962795,15962809-15963102
Length = 216
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEG 294
L HR+AE+L ++ A+AVS D A + R L ++ G P G
Sbjct: 15 LFHRYAESLAARAAAVAVSFDYRVAPEHPCARGLRRRVG--GAPVG 58
>07_03_0768 + 21368058-21368624
Length = 188
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 467 QCMPSIDSMSLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVMLRPSKKLAIHLQ-RP 291
+C P++ S++L YR++ T + L + S P + ++H
Sbjct: 44 RCAPAVASLALYYRIREASPPTPFTFSLLLAALASSSFPPLPHPQALRASPTSMHSSAMR 103
Query: 290 SGIP*DGSFDRSALCQTLSKAFAI 219
S P DG+ + + +C + A A+
Sbjct: 104 SRTPPDGAMEIAEVCDDCACARAM 127
>07_01_1203 -
11464142-11464324,11464422-11464484,11464685-11466515,
11467240-11468036
Length = 957
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 398 VRCSPPRFSSCISMTCCLLMACIAMRMTARGMRDISAI 511
VR + PR S ++ TC ++ + +R+ A M+D+ A+
Sbjct: 747 VRVTLPRLPSWVNSTCVPHLSHLDLRVKAMEMQDLEAL 784
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 298 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 429
CK + L+ I + +G SD G+ QG LSP LF+L
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVL 246
>01_05_0674 - 24187820-24188713,24188809-24189204
Length = 429
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 247 ARPCRRPSRYQGSQQEPRPCSPRLQPTCE*GIREDRQLSDRDGNRT 110
A P P Q + +P P P LQP C+ I+E+R +D D RT
Sbjct: 284 AAPRSPPGDAQVAANQPPP--PPLQPQCQPHIKEER--ADDDDVRT 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,655
Number of Sequences: 37544
Number of extensions: 361268
Number of successful extensions: 1161
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -