SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0536
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943...    64   5e-11
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477...    64   8e-11
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177...    60   1e-09
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659...    50   8e-07
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320...    32   0.24 
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060...    31   0.72 
04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230           30   0.95 
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545...    30   1.3  
03_02_0091 + 5574528-5577254                                           30   1.3  
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340...    30   1.3  
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485...    29   1.7  
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581...    29   1.7  
07_03_1528 + 27474973-27475289,27476890-27477073,27477081-274772...    28   3.8  
07_01_0087 + 676501-677907                                             28   3.8  
02_05_0525 + 29764176-29764518,29765351-29765679                       28   3.8  
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002     28   5.1  
10_08_0412 - 17729765-17730283,17731256-17731726                       27   6.7  
05_02_0075 - 6359897-6360292,6360463-6360465                           27   6.7  
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776     27   8.8  
12_01_0669 + 5693047-5693141,5694222-5694344,5694528-5694630,569...    27   8.8  
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211...    27   8.8  
11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893           27   8.8  
09_04_0241 + 15962439-15962795,15962809-15963102                       27   8.8  
07_03_0768 + 21368058-21368624                                         27   8.8  
07_01_1203 - 11464142-11464324,11464422-11464484,11464685-114665...    27   8.8  
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659...    27   8.8  
01_05_0674 - 24187820-24188713,24188809-24189204                       27   8.8  

>06_02_0297 -
           13891954-13892556,13893019-13893855,13894179-13894394,
           13895455-13895874,13896198-13896506
          Length = 794

 Score = 64.5 bits (150), Expect = 5e-11
 Identities = 36/113 (31%), Positives = 56/113 (49%)
 Frame = +1

Query: 91  QLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 270
           +L+SD  YGF  G++  D   +      +  +SK E + + LD  KAFD + H A+LS +
Sbjct: 415 KLVSDNHYGFIKGKTIQDCPAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVM 474

Query: 271 PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 429
              G P    +W+       S  V+++G   ++     GV QG  LS  LF+L
Sbjct: 475 QHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVPLSLLLFVL 527


>07_03_1291 +
           25545749-25546262,25546989-25547669,25547693-25547751,
           25549152-25549242,25549330-25549743,25550191-25550243,
           25550947-25551177,25551492-25551708,25551790-25551890,
           25552446-25552532,25553536-25553676,25553839-25553961,
           25554070-25554522,25554931-25555308,25555410-25556060,
           25556264-25556368,25556482-25556707,25557204-25557241
          Length = 1520

 Score = 63.7 bits (148), Expect = 8e-11
 Identities = 40/113 (35%), Positives = 54/113 (47%)
 Frame = +1

Query: 109 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 288
           Q GF  GR   + L+Y T         K + L + LD AKAFD V  ++L   L   G P
Sbjct: 6   QTGFLKGRCISENLIYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFP 65

Query: 289 EGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDML 447
           +    WI + L      V++ G     +T   G+ QG  LSP LFIL + D+L
Sbjct: 66  DNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFIL-VADVL 117


>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
            1778770-1778900,1779530-1779788,1779823-1780098,
            1780100-1781352
          Length = 1344

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 41/137 (29%), Positives = 62/137 (45%)
 Frame = +1

Query: 37   KVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSL 216
            K++ +++  +L +     ++I   Q GF  GR   + L+Y T         K + + V L
Sbjct: 999  KILSKVLATRLQRVF--LRMIHLDQTGFLKGRCISENLIYATELIQACYRRKCQTIIVKL 1056

Query: 217  DIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQ 396
            D  KAFD V   +L   L   G PE    WI   L      V+++G     +    G+ Q
Sbjct: 1057 DFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGLLQ 1116

Query: 397  GSVLSPTLFILYINDML 447
            G  LS  LFIL + D+L
Sbjct: 1117 GDPLSSYLFIL-VADVL 1132


>02_02_0078 +
           6587491-6588021,6588160-6589151,6592430-6592607,
           6592635-6592794,6592992-6593158,6593246-6593869
          Length = 883

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
 Frame = +1

Query: 25  SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGD--LLVYLTHRWAEALESKGE 198
           ++L K+  +++  +L  +L D  ++S+ Q  F  GR   D  L+ Y      +   +K  
Sbjct: 194 NVLYKIASKVLANRLKLFLPD--IVSEFQSAFVPGRLITDSSLVAYECLNTIKKQSNKKP 251

Query: 199 ALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTI 378
             A+ +D+ KA+DR+    L   L   G  +     +   +      + ++G+ +DT+  
Sbjct: 252 FFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTDTVVP 311

Query: 379 NAGVPQGSVLSPTLFIL 429
           + G+ QG  +SP LF+L
Sbjct: 312 SRGIRQGDPISPYLFLL 328


>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
            17532062-17533525
          Length = 1626

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
 Frame = +1

Query: 25   SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGD--LLVY-LTHRWAEALESKG 195
            +++ KV+ + +  +L   L+D  L+S  Q  F  GR   D  LL +   H   +  ++  
Sbjct: 974  NVVYKVVSKCLVNRLRPILDD--LVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANS 1031

Query: 196  EALAVSLDIAKAFDRVWHRALLSKLPSYG 282
             A A  LD++KA+DRV  R L   L   G
Sbjct: 1032 AACAYKLDLSKAYDRVDWRFLELALNKLG 1060


>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
            12406888-12407132,12409032-12409095,12409270-12409968,
            12410063-12410176,12410287-12410418,12410594-12410770,
            12411085-12411138,12411230-12411292,12411396-12412307,
            12412408-12412535,12413680-12413962
          Length = 1094

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 19/95 (20%), Positives = 38/95 (40%)
 Frame = +1

Query: 187  SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 366
            S  E +    ++    D  +H  +  +    G+ + L  W A   +G  + +V D +CS 
Sbjct: 886  SNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSS 945

Query: 367  TMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 471
            T  I+  V     + P   +  +   + I  + C+
Sbjct: 946  TYCISFRVKNAEAVPP---VKELRKTMRIQALRCH 977


>04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230
          Length = 362

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -3

Query: 361 SNRRLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPS 224
           +++R+++   +A P S    C DP+    ++    V Y+  CR PS
Sbjct: 18  TDQRVKKKRAAASPNSEDGYCADPKKLNALIEDIFVCYSLSCREPS 63


>09_06_0032 +
           20353789-20353963,20354240-20354340,20354426-20354560,
           20354633-20354714,20354829-20354896,20354984-20355073,
           20355133-20355257,20355384-20355717,20355841-20355957,
           20356058-20356485,20356564-20356813,20356944-20357194,
           20357278-20357587
          Length = 821

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   AAGIRHEASLLSKVMERIINI--QLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWA 174
           +A     A +L +  E I N+  QL + +E +  +  +   FR   S GD+  +L  RW+
Sbjct: 351 SASCTSHAEILREKDELIKNLEEQLKELMEQKDTVQSQLDNFRKVASDGDINNHLARRWS 410

Query: 175 EALES 189
            + +S
Sbjct: 411 RSSDS 415


>03_02_0091 + 5574528-5577254
          Length = 908

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = +1

Query: 181 LESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC 360
           L++ G+  AV     K  D + HR  L  LP  G P+   + I   L   S  +++DG  
Sbjct: 212 LDAPGDCAAVG----KMQDAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVT 267

Query: 361 SDTMTINAGVP 393
                ++ GVP
Sbjct: 268 KPVDLVDIGVP 278


>02_01_0473 -
           3403547-3404241,3404455-3404983,3405299-3405477,
           3405868-3405952,3406136-3406482,3407061-3407159,
           3408135-3408636
          Length = 811

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 30/82 (36%), Positives = 37/82 (45%)
 Frame = +1

Query: 205 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 384
           A+ LD++KA+DRV    L   L   G  +   KW  S              C D   I  
Sbjct: 235 ALKLDLSKAYDRVDWAFLDGVLQRMGFGDTWRKWTMS--------------CVDICPIR- 279

Query: 385 GVPQGSVLSPTLFILYINDMLS 450
           G+ QG  LSP LF L+I D LS
Sbjct: 280 GLRQGDPLSPYLF-LFIADGLS 300


>04_03_0658 +
           18447986-18448117,18448204-18448317,18448388-18448507,
           18448589-18449215,18449289-18449462,18449545-18449809,
           18449889-18449959,18450043-18450145,18450221-18450280,
           18450533-18450744,18450830-18450901,18451446-18451502,
           18451598-18451882,18452359-18452371,18452396-18452463,
           18452649-18452747,18452836-18452967,18453038-18453141,
           18453234-18453423,18453519-18453524
          Length = 967

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = +1

Query: 208 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMT 375
           +S+   +   R   ++LL+   S+ +P     WIA+ +D  S  +VVD        D + 
Sbjct: 151 LSVHDKEVIGRTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVH 209

Query: 376 INAGVPQGSVLSPTLFILYINDMLSIDG 459
           I  G+P G +   + F L  N +L   G
Sbjct: 210 IILGLPVGGIEISSNFELGKNKILETFG 237


>01_01_0753 -
           5814087-5814344,5814461-5814646,5814847-5815004,
           5815082-5815214,5815299-5815489,5815826-5816281,
           5816543-5816661,5816729-5816872,5816994-5817065,
           5817368-5817500,5817598-5817733
          Length = 661

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 265 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 366
           KLP     + +C W A +L G+S + +VD    +
Sbjct: 563 KLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKE 596


>07_03_1528 +
           27474973-27475289,27476890-27477073,27477081-27477261,
           27477270-27478206,27478384-27479035,27479352-27479798
          Length = 905

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -1

Query: 492 IPRAVIRIAM--HAINRQHVIDIQDEKRGGEHRTLWNASVNGHGI 364
           IP A++R+++  + +   +   + D+K  GE  T++ + V G GI
Sbjct: 297 IPAALVRVSLAGYRLAEHNYFGVDDQKNFGESLTIFYSMVLGQGI 341


>07_01_0087 + 676501-677907
          Length = 468

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
 Frame = +1

Query: 31  LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSA-GDLLVYLTHRWAEA--LESKGEA 201
           +SK++ R  N+ L   +E   L  D    F  G     D +VY T        L++ G+ 
Sbjct: 246 MSKILARYDNLHLHPQIE--HLREDGTVVFVDGTCVVADAVVYCTGNTYSYPFLDTDGKV 303

Query: 202 LAVSLDIAKAFDRVWHRALLSKLPSYGIP---------EGLCKWIASFLDGR 330
                 +   FD V+  AL   L   GIP         E   +W+A  L GR
Sbjct: 304 TVDDNRVGPLFDHVFPPALAPSLSFVGIPAMVVVPLFNEVQARWVAQVLSGR 355


>02_05_0525 + 29764176-29764518,29765351-29765679
          Length = 223

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +1

Query: 172 AEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVV 345
           AE +  +G   AV+ D+  A  R   RA L+     G  E +C+W+A  L+ R + +V
Sbjct: 55  AEGVARRGYR-AVTFDMRGA-GRSTGRASLTGSTEVGDVEAVCRWVADNLNPRGVLLV 110


>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
          Length = 877

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 221 SRRPSTGSGIGHFCRSYHLTESPRVSASGSLAFWMGG 331
           +RR  +G G G++C   H+    R  AS     W+ G
Sbjct: 346 ARRVGSGGGGGYYCSVEHVVTEVRALASCDGGIWLVG 382


>10_08_0412 - 17729765-17730283,17731256-17731726
          Length = 329

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 229 PSRYQGSQQEPRPCSPRLQPTCE 161
           PSRY+ ++Q+ + C+P    TC+
Sbjct: 244 PSRYEINKQQVQQCTPSFTATCD 266


>05_02_0075 - 6359897-6360292,6360463-6360465
          Length = 132

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +2

Query: 245 GIGHFCRSYHLTESPRVSASGSLAFWMGGASRSL*TAIALIP*PLTLAFH 394
           G+GH C  +H      V A G    W     R+  +A   +  PL LAFH
Sbjct: 37  GMGHNCHKHHQGPPVSVPAKGEARRWGPWFGRTRGSAEPPLA-PLILAFH 85


>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
          Length = 320

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 414 GGEHRTLWNASVNGHGIRAIAVYNDRDAPPI 322
           GGE    WNA VNG  +  +A     D PP+
Sbjct: 2   GGEVVRHWNADVNGISLH-VAEQGPADGPPV 31


>12_01_0669 +
           5693047-5693141,5694222-5694344,5694528-5694630,
           5694793-5695041
          Length = 189

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -1

Query: 261 QKCPMPDPVEGLRDIKAHSKSL---ALALQGFSPPVSKVY 151
           +K  +P+ V   R  K H  SL   A+ + GF PP ++V+
Sbjct: 46  KKIELPEDVYVKRFFKKHPDSLYHDAIKISGFDPPPARVF 85


>11_01_0285 -
           2115051-2115146,2115220-2115306,2115417-2115503,
           2115724-2115809,2115889-2115992,2117447-2117533,
           2117621-2117744,2118420-2118538,2118626-2118755,
           2118902-2118990,2119122-2119210,2119985-2120078,
           2120187-2120266,2120363-2120452,2121195-2121281,
           2121381-2121425,2121847-2121923,2121997-2122102,
           2122258-2122339,2122430-2122501,2122502-2122585,
           2123007-2123084,2123155-2123224,2123737-2123851
          Length = 725

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +1

Query: 253 ALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY 432
           A+ S L  +GIPEG C  I  +   R   ++VD  C+    ++  VP    L P   + +
Sbjct: 155 AIGSGLIYHGIPEGAC--IGLYFINRPEWIIVDHACAAYSFVS--VPLYDTLGPDA-VQF 209

Query: 433 INDMLSIDGMHC 468
           I +  +++ + C
Sbjct: 210 IVNHATVEAIFC 221


>11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893
          Length = 549

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
 Frame = +1

Query: 121 RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC 300
           RH    GD    L H +A+ LE++  A A SL+           + +  L +Y +    C
Sbjct: 227 RHSSPTGDATERLAHYFADGLEAR-LAGAASLERRLVASAEERASAMELLEAYQVFMAAC 285

Query: 301 --KWIASFLDGRSITVVVDG 354
             KW+A      +I    +G
Sbjct: 286 CFKWVAFTFANMAILRAAEG 305


>09_04_0241 + 15962439-15962795,15962809-15963102
          Length = 216

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 157 LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEG 294
           L HR+AE+L ++  A+AVS D   A +    R L  ++   G P G
Sbjct: 15  LFHRYAESLAARAAAVAVSFDYRVAPEHPCARGLRRRVG--GAPVG 58


>07_03_0768 + 21368058-21368624
          Length = 188

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = -2

Query: 467 QCMPSIDSMSLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVMLRPSKKLAIHLQ-RP 291
           +C P++ S++L YR++     T    +  L  + S   P         +   ++H     
Sbjct: 44  RCAPAVASLALYYRIREASPPTPFTFSLLLAALASSSFPPLPHPQALRASPTSMHSSAMR 103

Query: 290 SGIP*DGSFDRSALCQTLSKAFAI 219
           S  P DG+ + + +C   + A A+
Sbjct: 104 SRTPPDGAMEIAEVCDDCACARAM 127


>07_01_1203 -
           11464142-11464324,11464422-11464484,11464685-11466515,
           11467240-11468036
          Length = 957

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 398 VRCSPPRFSSCISMTCCLLMACIAMRMTARGMRDISAI 511
           VR + PR  S ++ TC   ++ + +R+ A  M+D+ A+
Sbjct: 747 VRVTLPRLPSWVNSTCVPHLSHLDLRVKAMEMQDLEAL 784


>02_02_0604 -
           12064451-12065683,12065729-12065827,12065858-12065955,
           12066782-12066924,12067233-12067729
          Length = 689

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 298 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 429
           CK +   L+   I +  +G  SD      G+ QG  LSP LF+L
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVL 246


>01_05_0674 - 24187820-24188713,24188809-24189204
          Length = 429

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -3

Query: 247 ARPCRRPSRYQGSQQEPRPCSPRLQPTCE*GIREDRQLSDRDGNRT 110
           A P   P   Q +  +P P  P LQP C+  I+E+R  +D D  RT
Sbjct: 284 AAPRSPPGDAQVAANQPPP--PPLQPQCQPHIKEER--ADDDDVRT 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,655
Number of Sequences: 37544
Number of extensions: 361268
Number of successful extensions: 1161
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -