Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0536
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 105 3e-23
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 105 3e-23
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 95 7e-20
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 95 7e-20
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 94 1e-19
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 93 2e-19
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 93 2e-19
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 93 2e-19
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 93 3e-19
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 90 1e-18
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 88 6e-18
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 88 8e-18
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 87 1e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 87 2e-17
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 85 7e-17
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 83 2e-16
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 83 3e-16
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 83 3e-16
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 83 3e-16
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 83 3e-16
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 83 3e-16
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 81 7e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 81 1e-15
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 72 5e-13
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 54 9e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 44 2e-04
BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p pro... 28 6.5
AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p pro... 28 8.5
AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-P... 28 8.5
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 105 bits (253), Expect = 3e-23
Identities = 59/153 (38%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++E++I ++L+K+L+ + QYGFR+G + + L + E+++SK V
Sbjct: 547 LSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLV 606
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NAGV
Sbjct: 607 TLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGV 666
Query: 391 PQGSVLSPTLFILYINDMLSIDG--MHCYADDS 483
PQGSVL PTLF ++ +D+ + +ADD+
Sbjct: 667 PQGSVLGPTLFNIFTHDIPQATNCVLSLFADDA 699
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 105 bits (253), Expect = 3e-23
Identities = 59/153 (38%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++E++I ++L+K+L+ + QYGFR+G + + L + E+++SK V
Sbjct: 495 LSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLV 554
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NAGV
Sbjct: 555 TLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGV 614
Query: 391 PQGSVLSPTLFILYINDMLSIDG--MHCYADDS 483
PQGSVL PTLF ++ +D+ + +ADD+
Sbjct: 615 PQGSVLGPTLFNIFTHDIPQATNCVLSLFADDA 647
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 94.7 bits (225), Expect = 7e-20
Identities = 58/138 (42%), Positives = 78/138 (56%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
L K+MER+I +LL + + I Q+GFR + L + + EA+E+K A+
Sbjct: 524 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 583
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S I AGV
Sbjct: 584 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 642
Query: 391 PQGSVLSPTLFILYINDM 444
PQGSVL PTL+ ++ +DM
Sbjct: 643 PQGSVLGPTLYSVFASDM 660
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 94.7 bits (225), Expect = 7e-20
Identities = 58/138 (42%), Positives = 78/138 (56%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
L K+MER+I +LL + + I Q+GFR + L + + EA+E+K A+
Sbjct: 326 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 385
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S I AGV
Sbjct: 386 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 444
Query: 391 PQGSVLSPTLFILYINDM 444
PQGSVL PTL+ ++ +DM
Sbjct: 445 PQGSVLGPTLYSVFASDM 462
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 93.9 bits (223), Expect = 1e-19
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++ERI+ +L + I Q+GFR A L +T +A + K A
Sbjct: 570 LSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSAT 629
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAG 387
LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AG
Sbjct: 630 FLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAG 688
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS+L P L+ +Y +DM
Sbjct: 689 VPQGSILGPVLYSIYSSDM 707
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 93.5 bits (222), Expect = 2e-19
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++ERI+ +L + I Q+GFR A L +T +A + K A
Sbjct: 123 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSAT 182
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAG 387
LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AG
Sbjct: 183 FLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAG 241
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS+L P L+ +Y +DM
Sbjct: 242 VPQGSILGPVLYSIYSSDM 260
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 93.5 bits (222), Expect = 2e-19
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++ERI+ +L + I Q+GFR A L +T +A + K A
Sbjct: 570 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSAT 629
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAG 387
LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AG
Sbjct: 630 FLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAG 688
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS+L P L+ +Y +DM
Sbjct: 689 VPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 93.5 bits (222), Expect = 2e-19
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK++ERI+ +L + I Q+GFR A L +T +A + K A
Sbjct: 570 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSAT 629
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAG 387
LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AG
Sbjct: 630 FLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAG 688
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS+L P L+ +Y +DM
Sbjct: 689 VPQGSILGPVLYSIYSSDM 707
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 92.7 bits (220), Expect = 3e-19
Identities = 53/147 (36%), Positives = 80/147 (54%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEAL 204
S LSK+ ER+I +L + +R+++ D Q+GFR G S + + LT +A + K
Sbjct: 521 SSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCN 580
Query: 205 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 384
AV +D+ +AFDRVWH L+SK+ P + S+L+ R V V S + A
Sbjct: 581 AVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
Query: 385 GVPQGSVLSPTLFILYINDMLSIDGMH 465
GVPQGSVL P L+ ++ D+ + H
Sbjct: 640 GVPQGSVLGPLLYSVFTADLPCPNAYH 666
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/138 (36%), Positives = 76/138 (55%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
+SKV ER+I ++++ +E + + + Q+GFR G + L + + A +SK ++
Sbjct: 522 ISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSL 581
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LDI +AFDRVWH L K+ +P + S+L+GR V S + AGV
Sbjct: 582 FLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGV 640
Query: 391 PQGSVLSPTLFILYINDM 444
PQGSVL P L+ LY +DM
Sbjct: 641 PQGSVLGPLLYCLYSHDM 658
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 88.2 bits (209), Expect = 6e-18
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
++K++++II +L + LI+D+Q+GF+ G+S D L+Y+ + +SK V
Sbjct: 517 IAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYL---ITKSKMHTSLV 573
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
+LD ++AFDRV +++ +L + + K+I +F+ R ITV V S + + G+
Sbjct: 574 TLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGI 633
Query: 391 PQGSVLSPTLFILYINDMLSIDGMH------CYADD 480
PQGS +S LF++ N + +I +H YADD
Sbjct: 634 PQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADD 669
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 87.8 bits (208), Expect = 8e-18
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEAL 204
S L K +E+II +L +++ LIS Q F+ S D L+ + H + AL +K
Sbjct: 520 SCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVS 579
Query: 205 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 384
++ D +AFDRV A+L +L +GI L I +F+ RS V ++ S++ ++
Sbjct: 580 ILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHN 639
Query: 385 GVPQGSVLSPTLFILYINDMLSIDGMH------CYADDS 483
G+PQGS LS LF++ I D+ I H YADD+
Sbjct: 640 GIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDA 678
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 87.0 bits (206), Expect = 1e-17
Identities = 55/139 (39%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L K ++ I Q+GFR + + +T EA E K AV
Sbjct: 567 LSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAV 626
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAG 685
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 686 VPQGSNLGPLLYSIFSSDM 704
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 86.6 bits (205), Expect = 2e-17
Identities = 49/140 (35%), Positives = 76/140 (54%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEAL 204
S +SK+ E+ + I+L ++ +I Q+GFR + + +T A E +
Sbjct: 518 SCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCT 577
Query: 205 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 384
AV LD+++AFD+VW L+ K+ +PE K + S+L R V + S TI A
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
Query: 385 GVPQGSVLSPTLFILYINDM 444
GVPQGSVL PTL+++Y D+
Sbjct: 637 GVPQGSVLGPTLYLIYTADI 656
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 84.6 bits (200), Expect = 7e-17
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 579 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 638
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I AG
Sbjct: 639 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAG 697
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 698 VPQGSNLGPLLYSIFSSDM 716
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/137 (34%), Positives = 71/137 (51%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ E+++ +++ +L + Q+GFR + + +T A E + A+
Sbjct: 518 LSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAI 577
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LD+A+AFDRVW LL K+ +P+ K + S+L R + D S I AGV
Sbjct: 578 FLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGV 636
Query: 391 PQGSVLSPTLFILYIND 441
PQGSVL P L+ LY D
Sbjct: 637 PQGSVLGPILYTLYTAD 653
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 451 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 510
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I AG
Sbjct: 511 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 569
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 570 VPQGSNLGPILYSIFSSDM 588
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 626
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 686 VPQGSNLGPILYSIFSSDM 704
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 626
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 686 VPQGSNLGPILYSIFSSDM 704
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 529 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 588
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I AG
Sbjct: 589 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 647
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 648 VPQGSNLGPILYSIFSSDM 666
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ ER++ +L + ++ I Q+GFR + +T EA E K AV
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAV 626
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAG 387
LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 388 VPQGSVLSPTLFILYINDM 444
VPQGS L P L+ ++ +DM
Sbjct: 686 VPQGSNLGPILYSIFSSDM 704
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 81.4 bits (192), Expect = 7e-16
Identities = 47/138 (34%), Positives = 73/138 (52%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ E+ + +++ +L+ + Q+ F A + + +T A E + A+
Sbjct: 59 LSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTAL 118
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LD+A+AFDRVW L+ K+ +P+ + K + S+LD R V S TI AGV
Sbjct: 119 FLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGV 177
Query: 391 PQGSVLSPTLFILYINDM 444
PQGSVL P L+ LY D+
Sbjct: 178 PQGSVLGPILYTLYTADI 195
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 80.6 bits (190), Expect = 1e-15
Identities = 46/137 (33%), Positives = 70/137 (51%)
Frame = +1
Query: 31 LSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAV 210
LSK+ E+++ +++ +L + Q+GFR + + +T A E + A+
Sbjct: 518 LSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAI 577
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
LD+A+AFDRVW LL K+ +P+ K + S+L + D S I AGV
Sbjct: 578 FLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGV 636
Query: 391 PQGSVLSPTLFILYIND 441
PQGSVL P L+ LY D
Sbjct: 637 PQGSVLGPILYTLYTAD 653
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 71.7 bits (168), Expect = 5e-13
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Frame = +1
Query: 28 LLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALE------- 186
++ K+ ERI+ ++ E + +QYGFR G+S D L +T +AL+
Sbjct: 487 IVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKALDGNRWLGG 546
Query: 187 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 366
SK ++LD+ AF+ +L + + G+P+ + I ++ R + V + D
Sbjct: 547 SKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE-DGPR 605
Query: 367 TMTINAGVPQGSVLSPTLFILYINDMLSID-----GMHCYADD 480
+ ++AGVPQGSVL P L+ + + +LSI +HC+ADD
Sbjct: 606 SHQVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADD 648
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +1
Query: 211 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 390
+LD++KAFD + H ++ L +YG P+G ++ + +G ++ DG S+ GV
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGV 539
Query: 391 PQGSVLSPTLFILYINDML 447
QG LSP LF L ++ +L
Sbjct: 540 KQGDPLSPILFNLVMDRLL 558
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = +1
Query: 109 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 288
Q+GFR GR D ++ + + + L +D AFD V A LS+L G
Sbjct: 544 QFGFRQGRCVEDAWRHV--KSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGCR 601
Query: 289 EGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHC 468
E + W SF GR V+ + + + G PQGS+ P ++ + ++ +L +C
Sbjct: 602 E-MGLW-QSFFSGRR-AVIRSSSGTVEVPVTRGCPQGSISGPFIWDILMDVLLQRLQPYC 658
Query: 469 ----YADD 480
YADD
Sbjct: 659 QLSAYADD 666
>BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p
protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 310 RSTCRDP-RGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTC 164
R TCR P V +T +R CR+ G ++ C PR +P C
Sbjct: 310 RMTCRMPWTRTATRVPTTVTSGSRRCRKCRTAAGQRESAALCRPRPRPRC 359
>AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p
protein.
Length = 1196
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 301 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEP 197
C + GF A P PC++P SQQ P
Sbjct: 506 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQSP 540
>AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-PA
protein.
Length = 1534
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 301 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEP 197
C + GF A P PC++P SQQ P
Sbjct: 844 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQSP 878
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,267,923
Number of Sequences: 53049
Number of extensions: 562879
Number of successful extensions: 1710
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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