Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0536
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 74 5e-14
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 67 6e-12
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 65 3e-11
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 3e-09
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 47 7e-06
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 33 0.091
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 33 0.091
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 33 0.091
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 31 0.48
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.48
AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 29 2.6
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 29 2.6
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 28 3.4
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 6.0
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 74.1 bits (174), Expect = 5e-14
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Frame = +1
Query: 169 WAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVV 348
W ++++ + + LD +KAFDR+ H LL KL S + L W+ FL RS V +
Sbjct: 4 WTKSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRI 63
Query: 349 DGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSI--DGMHC--YADDS 483
S GVPQG+VLSP LF +Y+ND+ SI + + C +ADD+
Sbjct: 64 GQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDT 112
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 67.3 bits (157), Expect = 6e-12
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Frame = +1
Query: 25 SLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKG--- 195
SLLS + +++ +LK +++ Q+GF+ S ++ +T+ L K
Sbjct: 409 SLLSPIA-KLLEKAILKRIKNSIESPAHQHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPE 467
Query: 196 EALAVSLDIAKAFDRVWHRALLSKL-PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM 372
A+ LD+ AFD+V + L + L + GI + W+ ++L R I D S
Sbjct: 468 RAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWH 527
Query: 373 TINAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGDAR 498
T+ GVPQGSV+SP LF Y+ DM + + YADD + AR
Sbjct: 528 TLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIAR 571
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 64.9 bits (151), Expect = 3e-11
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 226 KAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGS 402
KAFD+V H LL KL +GI C W FL R+ +V V+ + I++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 403 VLSPTLFILYINDML 447
V P LF+++IN +L
Sbjct: 62 VSGPFLFLIFINSLL 76
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Frame = +1
Query: 265 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS-DTMTINAGVPQGSVLSPTLFILYIND 441
KL +G+ C W FL+ R+ +V ++ S ++ I++GVPQGSV P LFIL+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 442 MLSID-----GMHCYADD 480
+L ID + C+ADD
Sbjct: 899 LL-IDLAPTINISCFADD 915
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 160 TH-RWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSI 336
TH ++ E +E+ + ++ AFD+V H L+SKL + + L W + ++
Sbjct: 873 THCKYEEYVEAHKRVDLIHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTF 932
Query: 337 TVVVDGDC-SDTMTINAGVPQGSVLSPTLFILYINDML 447
+V V+ S+ G P+GS +F+++IN +L
Sbjct: 933 SVQVNDHLESEKHNCQIGAPRGSESRQFMFLVFINSLL 970
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 33.5 bits (73), Expect = 0.091
Identities = 34/132 (25%), Positives = 53/132 (40%)
Frame = +1
Query: 28 LLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALA 207
+L KV + + ++ + L++ Q + Q GFR S D + L E +
Sbjct: 460 VLYKVFTKCLLNRMRRSLDEAQPVE--QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL 517
Query: 208 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 387
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 576
Query: 388 VPQGSVLSPTLF 423
V QG +SP LF
Sbjct: 577 VRQGDPISPNLF 588
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 33.5 bits (73), Expect = 0.091
Identities = 34/132 (25%), Positives = 53/132 (40%)
Frame = +1
Query: 28 LLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALA 207
+L KV + + ++ + L++ Q + Q GFR S D + L E +
Sbjct: 631 VLYKVFTKCLLNRMRRSLDEAQPVE--QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL 688
Query: 208 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 387
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 689 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 747
Query: 388 VPQGSVLSPTLF 423
V QG +SP LF
Sbjct: 748 VRQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 33.5 bits (73), Expect = 0.091
Identities = 34/132 (25%), Positives = 53/132 (40%)
Frame = +1
Query: 28 LLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALA 207
+L KV + + ++ + L++ Q + Q GFR S D + L E +
Sbjct: 370 VLYKVFTKCLLNRMRRSLDEAQPVE--QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL 427
Query: 208 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 387
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 428 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 486
Query: 388 VPQGSVLSPTLF 423
V QG +SP LF
Sbjct: 487 VRQGDPISPNLF 498
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 443 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 357
+SL KS GE T+PCGTP + SE+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 31.1 bits (67), Expect = 0.48
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 166 RWAEALESKGEALAVSL---DIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSI 336
R + L+S G +++L D KAFD V H+A+ L G E +
Sbjct: 23 RSKDFLKSAGNTRSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYK-NCT 81
Query: 337 TVVVDGDCSDTMTINAGVPQGSVLSPTLF 423
T T+ + GV QG +SP LF
Sbjct: 82 TNFTPFLRPITVPVTKGVRQGDPISPNLF 110
>AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical
protein C17E7.9a protein.
Length = 285
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 222 REGLRQGLA*GTSVEATILRNPR 290
RE + +GLA GT V T+ R PR
Sbjct: 246 RENVHEGLADGTQVTTTVFRGPR 268
>AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical
protein C17E7.9b protein.
Length = 257
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 222 REGLRQGLA*GTSVEATILRNPR 290
RE + +GLA GT V T+ R PR
Sbjct: 218 RENVHEGLADGTQVTTTVFRGPR 240
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 353 AIALIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 463
A L+P P+TL F ++ C P F+ + C + C
Sbjct: 14 ANCLLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 50
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 353 AIALIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 463
A L+P P+TL F ++ C P F+ + C + C
Sbjct: 87 ANCLLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 123
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -3
Query: 259 EVPYARPCRRPSRYQGSQQE----PRPCSPRLQP 170
E P R R+PSR+ S + P PCSP P
Sbjct: 340 ENPPVRDSRKPSRFSASHADKKHYPAPCSPDANP 373
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 352 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPR 179
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 352 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPR 179
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 352 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPR 179
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 82 EDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFD 237
ED+Q S R Y HG + G + Y WAE KGE + ++ I + D
Sbjct: 1823 EDQQRTS-RNYFDTHGLAEG--VTYFFSVWAETSAGKGEQRSANVTIGPSKD 1871
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 443 MSLIYRMKSVGE--STEPCGTPALMVMVSEQSP 351
++L+Y + V STEPC + ++MV+E P
Sbjct: 10 LTLLYTLSPVSSQNSTEPCDSDKCLLMVAELGP 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,463,620
Number of Sequences: 27780
Number of extensions: 268353
Number of successful extensions: 859
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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