Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0536
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 491 SPVLSSA*QCMPSIDSMSLI 432
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 360 AIAVYNDRDAPPIQKASDPLAETLGDSVRW 271
           A+  Y D+D  PI   +D   +      RW
Sbjct: 427 AVQKYQDQDYQPIYFVADSFEDAKEKFRRW 456


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 241 PCRRPSRYQGSQQEPRPCSPRL 176
           P +  S  Q SQQ   PC P L
Sbjct: 35  PQQTQSVQQQSQQAGDPCDPSL 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,775
Number of Sequences: 438
Number of extensions: 3164
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)