Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0535
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   5.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.7  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 274 TP*IRDDPFRPQLARLHNNVTGIESNIL 191
           TP  RD   RP   RLH+ + G   N+L
Sbjct: 94  TPDSRDYFSRPFEKRLHSRLPGRNFNLL 121


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 423 VAQEYNFTNSRAW 385
           V+ EYN  NSR W
Sbjct: 625 VSSEYNQYNSRIW 637


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 423 VAQEYNFTNSRAW 385
           V+ EYN  NSR W
Sbjct: 625 VSSEYNQYNSRIW 637


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 163 IRSNIFKSQLKYLTL 207
           +R N F  +LKYLTL
Sbjct: 95  LRFNDFGGRLKYLTL 109


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 163 IRSNIFKSQLKYLTL 207
           +R N F  +LKYLTL
Sbjct: 95  LRFNDFGGRLKYLTL 109


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 213 VTLLCNLANCGRNGSSLI 266
           VTL   L +C  NGS+L+
Sbjct: 184 VTLSVQLLSCEVNGSTLV 201


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,819
Number of Sequences: 438
Number of extensions: 3219
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)