Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0533
         (431 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    30   0.59 
At3g19920.1 68416.m02522 expressed protein                             29   1.8  
At1g17090.1 68414.m02081 expressed protein Pfam                        27   4.1  
At5g64660.1 68418.m08126 U-box domain-containing protein similar...    27   7.2  
At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR...    26   9.6  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 12/45 (26%), Positives = 28/45 (62%)
 Frame = -1

Query: 425 IHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 291
           +H   +KN+D+     +  +IE EF+++Q + I+ ++ + + L+R
Sbjct: 202 LHSVASKNNDV----HLADFIESEFLTEQVEAIKLISEYVAQLRR 242


>At3g19920.1 68416.m02522 expressed protein 
          Length = 416

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 267 FPVVLGYEPLEVRGVTREATNRIGLLTHEFLL-DVLSDLSI 386
           FPV+ GYE +EV     +A + +  L  E LL + L D S+
Sbjct: 352 FPVLTGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSV 392


>At1g17090.1 68414.m02081 expressed protein Pfam
          Length = 93

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 130 YGCLIVMYPFLF*AKNMLCNCF*AFSEI*YVPSIISSNKDFS 5
           Y C++V++     A N++ +CF  FS +    S+   N+DFS
Sbjct: 4   YNCIVVIFCISLFAINLVFSCFTCFSIL--QSSMKDENQDFS 43


>At5g64660.1 68418.m08126 U-box domain-containing protein similar to
           immediate-early fungal elicitor protein CMPG1
           [Petroselinum crispum] GI:14582200; contains Pfam
           profile PF04564: U-box domain
          Length = 420

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -1

Query: 386 DAEITQYIEEEFVSQQADTIRSLAGHTSDLKRF--ITENNGKD-LSLAVYLF 240
           D E T   +   V +    + ++    SD +RF  +   NG+D LS+ VYLF
Sbjct: 154 DFETTSAAKSLVVQEAVKILSTIRSKVSDRRRFSNLILTNGRDRLSVIVYLF 205


>At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1170

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 201 SKLCLDDXXXXXXXXXHGERQVFPVVLGYEPLEVR 305
           SK CLD+          G+ ++ PV    +P EVR
Sbjct: 78  SKWCLDELVKIMEQVKKGKLRIMPVFFNVKPEEVR 112


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,501,285
Number of Sequences: 28952
Number of extensions: 147864
Number of successful extensions: 262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)