Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0532
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5JZX3 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_A0CR00 Cluster: Chromosome undetermined scaffold_245, w...    34   2.4  
UniRef50_Q4A939 Cluster: Putative uncharacterized protein; n=3; ...    33   5.7  

>UniRef50_A5JZX3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 754

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = -3

Query: 385 KKYTNFNICKFITFFYNS*FIYWCTNLILKFILSSMELFYRNLWLRCLLVTNFK-N*IKF 209
           KKY    +C F++F Y    IY   + ++K+IL+ +  FY+ L  +   +  F  N + +
Sbjct: 178 KKYVMTMLCTFLSFLY---LIY---SGVIKYILNKISKFYKYLLKKVFKINKFLFNILPY 231

Query: 208 IKQLLSDSYCPRVLNPKYIIYFLYEFRY---TNFTALSITFYDYVS 80
           +   L  +   + L   +I +F+Y   +   + ++ + I  Y Y+S
Sbjct: 232 LLSSLLYATLVKTLPMSFISFFIYSIFFPLPSVYSVVIILKYVYLS 277


>UniRef50_A0CR00 Cluster: Chromosome undetermined scaffold_245,
           whole genome shotgun sequence; n=5; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_245,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 648

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -3

Query: 307 LILKFILSSMELFYRNLWLRCLLVTNFKN*IKFIKQLLSDSYCPRVLNPKYIIYFL 140
           ++LK I  S+  +  N+  +C+L T+ K   +FIKQL  D  C  ++  K+  + L
Sbjct: 550 ILLKLIQLSIHKYSSNVVEKCILETSPKTQKRFIKQLSQDIICLELMKNKFGTFVL 605


>UniRef50_Q4A939 Cluster: Putative uncharacterized protein; n=3;
           Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
           protein - Mycoplasma hyopneumoniae (strain J / ATCC
           25934 / NCTC 10110)
          Length = 287

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = -3

Query: 436 RLTIPSYKLCKQLRNV*KKYTNFNICKFITFFYNS*FIYWC--TNLILKFILSSMELFYR 263
           ++ IP + +C Q +N+  KY NFN+   +   Y   FIYW    NL+L+  +   ++   
Sbjct: 28  KVKIPIFTICFQ-KNI-PKYLNFNLKFILKLSYFENFIYWLIEQNLLLEKQIFQQKMLKN 85

Query: 262 NLWLRCL-LVTNF 227
            ++  CL +V NF
Sbjct: 86  KVF--CLKMVNNF 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,242,758
Number of Sequences: 1657284
Number of extensions: 8422799
Number of successful extensions: 17241
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17238
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)