Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0532
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 421 SYKLCKQLRNV*KKYTNFNICKFITFFYNS*FIYWCTNLIL 299
           S + C  + ++         C + T  Y+S  IY  TN+I+
Sbjct: 316 SLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 356


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 421 SYKLCKQLRNV*KKYTNFNICKFITFFYNS*FIYWCTNLIL 299
           S + C  + ++         C + T  Y+S  IY  TN+I+
Sbjct: 41  SLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 81


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 310 NLILKFILSSMELFYRNLWLRCLLVTNFK 224
           N+ILK    ++     NLW + L+V   K
Sbjct: 194 NVILKTRFKTINNILENLWAKKLIVVKDK 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,129
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)