Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0526
(492 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 48 3e-06
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 48 3e-06
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 43 1e-04
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 41 4e-04
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 41 5e-04
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 40 7e-04
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 40 7e-04
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 38 0.004
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 38 0.005
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 36 0.011
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 36 0.011
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 36 0.011
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 36 0.015
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 35 0.034
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 34 0.045
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 34 0.045
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 34 0.045
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 32 0.18
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 32 0.18
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 31 0.42
At1g19470.1 68414.m02425 kelch repeat-containing F-box family pr... 31 0.56
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 30 0.97
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 1.3
At4g09780.1 68417.m01607 meprin and TRAF homology domain-contain... 28 3.0
At1g19460.1 68414.m02424 kelch repeat-containing F-box family pr... 27 5.2
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ... 27 9.1
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +3
Query: 234 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 401
L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403
Query: 402 LRDLLQFMYQGEVNVK 449
+ ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.10
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 222 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 395
G L L D V L E + + AHK++L F + + ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254
Query: 396 SALRDLLQFMYQGEVNVKQEELA 464
L LLQ++Y G + + ELA
Sbjct: 255 PILHALLQYIYTGRTQILESELA 277
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +3
Query: 234 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 401
L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403
Query: 402 LRDLLQFMYQGEVNVK 449
+ ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.10
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 222 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 395
G L L D V L E + + AHK++L F + + ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254
Query: 396 SALRDLLQFMYQGEVNVKQEELA 464
L LLQ++Y G + + ELA
Sbjct: 255 PILHALLQYIYTGRTQILESELA 277
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 258 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQ 431
DV +GR ++AH+++LS SP+F++ F+ + + F K+ +S+ AL L+ F Y
Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233
Query: 432 GEVNVKQEELASFI 473
+ + +++ +
Sbjct: 234 DRLEISVDDMEDLV 247
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 207 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLK 383
+ + + F LL DVT G QAHKLVL+ S +F+ MF + + V +
Sbjct: 189 SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248
Query: 384 DVSHSALRDLLQFMYQGEVNVKQEELAS 467
D+ + LL FMY+ + E L +
Sbjct: 249 DLEPKVFKALLHFMYKDSLPGDVEPLTA 276
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 207 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 383
+ + + F LL + D+T G AHKLVL+ SP+F+ + F + V +
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241
Query: 384 DVSHSALRDLLQFMYQ 431
D+ + LLQFMY+
Sbjct: 242 DLEPKVFKALLQFMYK 257
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 40.3 bits (90), Expect = 7e-04
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Frame = +3
Query: 87 FFKVFLLPEL*-VQSLG*VPRRVVAIMASDEQFSLCWNNFHANMSAG--FHGLLSRGDLV 257
FFK LL ++ G + R V ++ S + C+N G F LL G
Sbjct: 143 FFKRSLLESSDYLKDNGLLVRCCVGVVKSRTEGPRCYNIPVPVSGLGQQFGKLLESGKGA 202
Query: 258 DVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQ 431
DVT +G AHKLVL+ S F+ ++F + + ++DV + LL F+Y
Sbjct: 203 DVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYW 262
Query: 432 GEVNVKQEELASFISTAEQL 491
E+ Q+ + + + A L
Sbjct: 263 DEMPDMQDLIGTDLKWASTL 282
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 210 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 386
++S F LL G DVT + EGRL+ AH+ +L+ S +F++ F + P+ +
Sbjct: 10 SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDP 69
Query: 387 VSHSAL 404
H ++
Sbjct: 70 TQHGSV 75
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 237 LSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRD 410
++ L DVT EGR AH++ L S F+ MF + + + ++
Sbjct: 535 VNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFEL 594
Query: 411 LLQFMYQGEVNVKQEELASFISTAEQ 488
+++F+Y G V++ E + A+Q
Sbjct: 595 MMRFIYTGSVDITNEISKDLLRAADQ 620
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Frame = +3
Query: 210 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMF-KMNPTQ---HP-- 368
+MS + LL G DVT + EGRL+ AH+ +L+ S +F++ F + +P+Q P
Sbjct: 11 SMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQPGAEPAN 70
Query: 369 -------------IVFLKDVSHSALRDLLQFMYQGEVNV 446
++ + V + LLQF+Y G+V++
Sbjct: 71 QTGSGARAAAVGGVIPVNSVGYEVFLLLLQFLYSGQVSI 109
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 207 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 383
+++ + F LL D D+T G +AH+LVL+ SP F+ E + + + +
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259
Query: 384 DVSHSALRDLLQFMYQ 431
D+ + LL ++Y+
Sbjct: 260 DMEPKVFKALLHYIYK 275
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 288 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 458
+ HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 459 LASFISTAEQ 488
S A++
Sbjct: 97 YRSLYLAADK 106
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 288 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 458
+ HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 459 LASFISTAEQ 488
S A++
Sbjct: 97 YRSLYLAADK 106
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 35.9 bits (79), Expect = 0.015
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Frame = +3
Query: 210 NMSAGFHGLLSRGDLVDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQH 365
+ S G +L+ VDV L A EG + AHKL+L+ S F+ MF+++ T+H
Sbjct: 9 HFSGGLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKH 68
Query: 366 -PIVFLKDVSHSALRDLLQFMYQG----EVNVKQEELASFIS 476
+ L ++ H L ++F+ NVKQ + +++
Sbjct: 69 VETITLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLA 110
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 34.7 bits (76), Expect = 0.034
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +3
Query: 222 GFHGLLSRGDLVDVTLAA-----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIV 374
GF +L VDV L A EG AHKLVLS S F++M + + Q +
Sbjct: 13 GFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETI 72
Query: 375 FLKDVSHSALRDLLQFMY 428
L ++ H L ++F+Y
Sbjct: 73 TLCEMKHEELEAFIEFIY 90
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 34.3 bits (75), Expect = 0.045
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 431
DVT +G+ AHK+ L S F+ MF V + ++ +++F+Y
Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYS 600
Query: 432 GEVNVKQEELASFISTAEQ 488
G +N+ + + A+Q
Sbjct: 601 GRINIAKHLAKDLLVAADQ 619
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 34.3 bits (75), Expect = 0.045
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 288 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 461
+ AHK VL SP F+ M + M + + + DVS+ ALR + ++Y E + ++
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 462 ASFISTAEQ 488
+ +E+
Sbjct: 140 CDLLVMSEK 148
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 34.3 bits (75), Expect = 0.045
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 207 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 380
+NM G LL D+ +AHKL+L+ SP F+ F + + +
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237
Query: 381 KDVSHSALRDLLQFMY 428
D+ S + +L F+Y
Sbjct: 238 DDIEPSIFKAMLSFIY 253
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +3
Query: 213 MSAGFHGLLSRGDL--VDVTLAAEGRLLQAHKLVLSVCSPYFQEMF----KMNPTQHPIV 374
+S+ LLS D D + +G + H+ +L+ S +FQ++F K++ T+ P
Sbjct: 44 LSSNLEQLLSNSDCDYSDAEIIVDGVPVGVHRCILAARSKFFQDLFKKEKKISKTEKPKY 103
Query: 375 FLKD------VSHSALRDLLQFMYQGEV 440
L++ V+H A L ++Y G +
Sbjct: 104 QLREMLPYGAVAHEAFLYFLSYIYTGRL 131
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 207 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYF 332
+N+ LL G DV +G AHKLVL+ SP F
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVF 228
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 31.1 bits (67), Expect = 0.42
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +3
Query: 87 FFKVFLLPEL*-VQSLG*VPRRVVAIMASDEQFSLCWNNFHANMSAG--FHGLLSRGDLV 257
FFK LL ++ G + R V ++ S + C+N G F LL G
Sbjct: 143 FFKRSLLESSDYLKDNGLLVRCCVGVVKSRTEGPRCYNIPVPVSGLGQQFGKLLESGKGA 202
Query: 258 DVTLAAEGRLLQAHKLVLSVCSPYFQ 335
DVT +G AHKLVL+ S F+
Sbjct: 203 DVTFEVDGETFPAHKLVLAARSAVFR 228
>At1g19470.1 68414.m02425 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 412
Score = 30.7 bits (66), Expect = 0.56
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 38 VLQKCVKCSVGNIELYFFQSVSPTGIISTKLRIGSTSSRRYHGV 169
+++KC S+ ++ YFF ++ +G+ T+ R+G + + Y +
Sbjct: 69 LIRKCDYPSLSSVSSYFFNLIASSGLYETRSRLGLSETFLYAAI 112
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 29.9 bits (64), Expect = 0.97
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 234 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALR 407
+L+ D+T+ A + AH+ VL+ SP F+ MF + + + + + D+ A +
Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQ 216
Query: 408 DLLQFMY 428
L ++Y
Sbjct: 217 AFLSYIY 223
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 255 VDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRD 410
VDV L A + + AHK +LS S F+EMF+ + ++ + L ++ H L
Sbjct: 23 VDVRLMARDSEKDAAISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEA 82
Query: 411 LLQFMY 428
+ F Y
Sbjct: 83 FVDFTY 88
>At4g09780.1 68417.m01607 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein low similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 443
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 240 SRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQH 365
S+G LV+ T+ E LL + + +C + F +NP QH
Sbjct: 351 SKGYLVEDTIVLETTLLCVTETKVKLCDMCKYKFFLLNPRQH 392
>At1g19460.1 68414.m02424 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 416
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +2
Query: 38 VLQKCVKCSVGNIELYFFQSVSPTGIISTKLRIGSTSSRRYHGV 169
+++KC S+ ++ YFF ++ + + T+ R+G + + Y +
Sbjct: 69 LIRKCDYPSLSSVSSYFFNLIASSELYETRSRLGLSETFLYAAI 112
>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 381
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 316 TDRTNLCA--CNNLPSAANVTSTRSPRDSRP*KPAD 215
+++ N C C++ P++ + +RSP S P PAD
Sbjct: 190 SNKNNRCCLFCSHSPTSTLLNLSRSPSSSPPLSPAD 225
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,744,346
Number of Sequences: 28952
Number of extensions: 218804
Number of successful extensions: 519
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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