Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0523
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   0.65 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   4.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 247 VKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFLEESIPDFNICSENV 393
           V K +    L+S    APNE   IF   +   DFL   + + NI S ++
Sbjct: 391 VSKFDKRSKLVSILEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSI 439


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +1

Query: 55  YNKIFASLKCNYKIC--YISEEVLYCLQYY 138
           Y+K F   + + KI   +  E  LYC  YY
Sbjct: 52  YSKSFHRNEIHIKIVLMFFKEASLYCFNYY 81


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 94  FYNCTSMRQIFYCINIYLLLFMYN 23
           F + T MR ++   NI+L+   YN
Sbjct: 402 FSDITFMRTVWKFFNIFLITPFYN 425


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 118 KLLHLYNIFYNCTSMRQIFYCINIYLLLFMYN 23
           KLL  + + YNC +  +       YLL+ +Y+
Sbjct: 98  KLLGNHQLVYNCHTFGRFLAPNLTYLLVALYS 129


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 130 VNSIKLLHLYNIFYNCTSMRQIFYCINIYLLLFMYN*FTT 11
           V  +++   YNI Y C  M  +   IN  L   M + F T
Sbjct: 321 VYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSSKFRT 360


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 96  MLYK*RSFILFTVL*PLLSFYRNKMNSKNFPKIQ 197
           +L K   F+L  ++ P+++FY   + + N  +I+
Sbjct: 114 LLLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIK 147


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 352 RENPNSPGPWRRSP 311
           ++N  SP P +RSP
Sbjct: 691 KQNEKSPSPQQRSP 704


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,415
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)