Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0523
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AF067942-10|AAG45578.2|  358|Caenorhabditis elegans Hypothetical...    27   5.6  
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical p...    27   9.8  
AF101309-3|AAN60514.1|  760|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -3

Query: 476 CCSKSNSA*SLEIPLSEQVLLIALEV---SDTFSEHMLKSGIDSSRKSK*SWSMEK 318
           CC   N    L I     + L  LE+   SDTF E  ++ G+D  ++    WSME+
Sbjct: 98  CCKDINVFLKLWIIGCANINLKLLEINSNSDTFDEKAIRKGVDYLKQ---PWSMER 150


>AF067942-10|AAG45578.2|  358|Caenorhabditis elegans Hypothetical
           protein ZK6.1 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 469 QNRIQHDHWKFHC 431
           QN+  H HW FHC
Sbjct: 85  QNKENHKHWAFHC 97


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
           protein F49E2.5j protein.
          Length = 1100

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +1

Query: 217 SSNKHY*IKSVKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFL---EESIPDFNICSE 387
           S N+    K  KK E E+ +      AP           D+LDF+   EE + +     E
Sbjct: 487 SENRKKNKKDKKKSESEKAVEEPVQAAPTSKKPTADDSMDFLDFVTAKEERVEEVAPVQE 546

Query: 388 NVSETSKA 411
            V E  K+
Sbjct: 547 QVKEQKKS 554


>Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical
           protein F49E2.5g protein.
          Length = 528

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +1

Query: 217 SSNKHY*IKSVKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFL---EESIPDFNICSE 387
           S N+    K  KK E E+ +      AP           D+LDF+   EE + +     E
Sbjct: 404 SENRKKNKKDKKKSESEKAVEEPVQAAPTSKKPTADDSMDFLDFVTAKEERVEEVAPVQE 463

Query: 388 NVSETSKA 411
            V E  K+
Sbjct: 464 QVKEQKKS 471


>Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical
           protein F49E2.5f protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +1

Query: 217 SSNKHY*IKSVKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFL---EESIPDFNICSE 387
           S N+    K  KK E E+ +      AP           D+LDF+   EE + +     E
Sbjct: 487 SENRKKNKKDKKKSESEKAVEEPVQAAPTSKKPTADDSMDFLDFVTAKEERVEEVAPVQE 546

Query: 388 NVSETSKA 411
            V E  K+
Sbjct: 547 QVKEQKKS 554


>AF101309-3|AAN60514.1|  760|Caenorhabditis elegans Hypothetical
           protein H24G06.1c protein.
          Length = 760

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 416 LIALEVSDTFSE-HMLKSGIDSSRKSK*SWSMEKISMSSFGAVHVSDMRPSSN 261
           L+A   S TF   +  +S I+ +R++K SWS  + S+   G+V+  +  PSS+
Sbjct: 347 LVASSSSPTFVVGYADRSLIEFARENK-SWSFRRASLGHTGSVNCIEPFPSSS 398


>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
           protein H24G06.1b protein.
          Length = 1601

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 416 LIALEVSDTFSE-HMLKSGIDSSRKSK*SWSMEKISMSSFGAVHVSDMRPSSN 261
           L+A   S TF   +  +S I+ +R++K SWS  + S+   G+V+  +  PSS+
Sbjct: 347 LVASSSSPTFVVGYADRSLIEFARENK-SWSFRRASLGHTGSVNCIEPFPSSS 398


>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
           protein H24G06.1a protein.
          Length = 1680

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 416 LIALEVSDTFSE-HMLKSGIDSSRKSK*SWSMEKISMSSFGAVHVSDMRPSSN 261
           L+A   S TF   +  +S I+ +R++K SWS  + S+   G+V+  +  PSS+
Sbjct: 347 LVASSSSPTFVVGYADRSLIEFARENK-SWSFRRASLGHTGSVNCIEPFPSSS 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,910,973
Number of Sequences: 27780
Number of extensions: 218746
Number of successful extensions: 519
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)