Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0521
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 57 7e-09
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 40 0.001
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 38 0.003
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 33 0.12
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 31 0.38
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 31 0.66
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829... 30 0.88
05_03_0258 - 11153709-11156090 30 1.2
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 29 2.7
04_03_1010 - 21704225-21704368,21706407-21706550,21706661-21706834 29 2.7
05_03_0285 + 11610471-11611262 28 4.7
04_04_1114 + 30995816-30996229,30997054-30997129,30997493-309975... 27 6.2
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 57.2 bits (132), Expect = 7e-09
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Frame = +3
Query: 18 RQNAHAVVNAGFLFHFKQSKN--VLQNVSIVYGGISPDFIHASKTEALLINQNPFTDKTL 191
R++ A+VNAG + ++ + ++ +VSI+YGG++ ASKTE L + + L
Sbjct: 477 REDDIALVNAGMRVYIRKVEGDWIISDVSIIYGGVAAVSHRASKTETFLTGKK-WDYGLL 535
Query: 192 QMALKSLNXXXXXXXXXXXXSAAYRKMLALALYYKAILSLSSE-SINPIYKSGGEVIK-- 362
L +R L L+ ++K L ++ E +I +K G
Sbjct: 536 DKTFDLLKEDVVLAENAPGGMVEFRSSLTLSFFFKFFLHVTHEMNIKGFWKDGLHATNLS 595
Query: 363 ------RSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFANDLP 491
R V GTQ +E ++ + QPV ++Q +GEA + +D P
Sbjct: 596 AIQSFTRPVGVGTQCYELVRQGTAVGQPVVHTSAMLQVTGEAEYTDDTP 644
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 39.5 bits (88), Expect = 0.001
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 13/169 (7%)
Frame = +3
Query: 24 NAHAVVNAGFLFHFKQSK----NVLQNVSIVYGGISPDF-IHASKTEALLINQNPFTDKT 188
NA + VN+ FL H K N+L N+ + +G I A K E L +
Sbjct: 338 NAVSYVNSAFLGHVSLDKSSGDNILSNLHLAFGAYGTKHAIRARKVEEYLTGKILSASVV 397
Query: 189 LQMALKSLNXXXXXXXXXXXXSAAYRKMLALALYYKAILSL--------SSESINPIYKS 344
L+ A++ L YR +A+ + + L + SI+
Sbjct: 398 LE-AIRLLRETIVPVEGTTHPE--YRVSVAVGFLFSFLSPLCKGVIESGKTLSISEDLVD 454
Query: 345 GGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFANDLP 491
V + +S ++ +D E P+ P+ K +V VQ SGEA++ +D+P
Sbjct: 455 TDNVHNKPLSSRRETL-SDDEYTPVGDPIKKYKVEVQASGEAIYVDDIP 502
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 38.3 bits (85), Expect = 0.003
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 12/168 (7%)
Frame = +3
Query: 24 NAHAVVNAGFLFHFKQSK----NVLQNVSIVYGGISPDF-IHASKTEALLINQNPFTDKT 188
NA + VN+ FL H K N+L N+ + +G + I A K E L +
Sbjct: 453 NAVSYVNSAFLGHVSLDKSSGDNILSNLHLAFGAYGTEHAIRARKVEEYLTGKILSASVV 512
Query: 189 LQMALKSLNXXXXXXXXXXXXSAAYRKMLALALYYKAILSLSSESINP--IYKSGGEVIK 362
L+ A++ L YR +A+ + + L I P +++
Sbjct: 513 LE-AIRLLRETIVPVEGTTHPE--YRVSVAVGFLFSFLSPLCKGVIEPGKTLSISEDLVH 569
Query: 363 RSVSHG---TQSFET--DKEVWPLNQPVPKLEVLVQCSGEAVFANDLP 491
H + ET E P+ P+ K +V +Q SGEA++ +D+P
Sbjct: 570 TDNVHNMPLSSRRETLSGDEYKPVGDPIKKYKVELQASGEAIYVDDIP 617
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 303 LSLSSESINPIYKSGGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFAN 482
+ +S + IN + KS R + Q E ++ P+ P K+ +Q SGEA++ +
Sbjct: 614 VDVSPKEINNV-KSDLHGNDRILESSKQVIEISEDYLPVGLPAKKVGAELQASGEAIYVD 672
Query: 483 DLP 491
D+P
Sbjct: 673 DIP 675
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 405 EVWPLNQPVPKLEVLVQCSGEAVFANDLP 491
E P+ +P+ K+ +Q SGEAV+ +D+P
Sbjct: 584 EYKPVGKPIKKVGAELQASGEAVYVDDIP 612
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 405 EVWPLNQPVPKLEVLVQCSGEAVFANDLP 491
E P+ +P+ K +Q SGEAV+ +D+P
Sbjct: 591 EYKPVGKPIEKTGAELQASGEAVYVDDIP 619
>07_01_0985 -
8297560-8297610,8297728-8297939,8298327-8298449,
8298763-8298817,8299940-8300077,8300187-8300261,
8300339-8300398,8301335-8301392,8301948-8302054,
8302484-8302558,8302643-8302838,8304222-8304301,
8308887-8309757,8310672-8310679
Length = 702
Score = 30.3 bits (65), Expect = 0.88
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 318 ESINPIYKSGGEVIKRSVSHGTQSFETDKEVW 413
E+ +PI KS +V+K+ +Q + D+EVW
Sbjct: 185 EATSPIKKSAKKVVKKCAKRRSQDDDDDEEVW 216
>05_03_0258 - 11153709-11156090
Length = 793
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 238 ISLGFNSSFKDFNAICNVLSVKGFWLISNASVFEAWMKSGEIP 110
IS GF +NA+ NVLS +G W + S+ +K+G P
Sbjct: 488 ISSGFTPCLTTYNALLNVLSRQGDWSTAQ-SIVSKMLKNGFKP 529
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 126 FIHASKTEALLINQNPFTDKTLQMALKSL 212
F HASKTEA+L+N+ T K +Q+ K+L
Sbjct: 217 FSHASKTEAVLVNRAQDT-KLVQLEQKAL 244
>04_03_1010 - 21704225-21704368,21706407-21706550,21706661-21706834
Length = 153
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 277 ANIFLYAADGSGGISLGFNSSFKDFNAICNVLSVKGFWLISNASV 143
+ +FL + G+ G+SL N S+ D +I + V+G L + SV
Sbjct: 78 SGVFLSSGIGTSGVSLELNLSYVDVASIGEEIEVEGKLLRAGKSV 122
>05_03_0285 + 11610471-11611262
Length = 263
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = -1
Query: 457 HCTSTSNLGTG*FSGHTSLSVSKD*VPCETLRFITSPPLLYIGFIDSELKLKIAL-*YKA 281
HCT G SGH + V +D F S P+L + L+IAL + +
Sbjct: 79 HCTIIVGTIFGRRSGHVTFCVQRDAAMPPPFLFELSVPMLSLAAEMGSGLLRIALECHHS 138
Query: 280 NANIFLYAADGS--GGISLGFNSSFKDFNAICN 188
+ + + AADG G S + A CN
Sbjct: 139 SGKVVVGAADGDTINNAGTGGGGSRSVWKASCN 171
>04_04_1114 +
30995816-30996229,30997054-30997129,30997493-30997587,
30997729-30997812,30998094-30998181,30998485-30998609,
30998687-30998785,31000089-31000190,31001570-31001680
Length = 397
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 90 NVSIVYGGISPDFIHASKTEA 152
NVS+VYG + PD A+K EA
Sbjct: 94 NVSVVYGVMPPDAYRAAKGEA 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,545
Number of Sequences: 37544
Number of extensions: 230656
Number of successful extensions: 453
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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