Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0518
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16) 51 8e-07
SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14) 46 3e-05
SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_5525| Best HMM Match : zf-C3HC4 (HMM E-Value=6.2e-12) 41 7e-04
SB_27393| Best HMM Match : zf-C3HC4 (HMM E-Value=4.8e-18) 39 0.003
SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14) 36 0.034
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 35 0.045
SB_23195| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-10) 35 0.059
SB_23318| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) 29 2.9
SB_16535| Best HMM Match : ShTK (HMM E-Value=2.2e-18) 29 2.9
SB_12797| Best HMM Match : HECT (HMM E-Value=0) 29 3.9
SB_31555| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 9.0
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 130 bits (314), Expect = 9e-31
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2
Query: 341 KSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAE 520
+ CWVCFAT+ D+ AWV+PC C GTTKWVHQSCLQRW+DEKQ GN V C QC +
Sbjct: 23 RRCWVCFATDEDEPSVAWVKPCLCRGTTKWVHQSCLQRWIDEKQAGNSAATVSCPQCNTD 82
Query: 521 YIVVFPSMGAFVAMLDAMEEITHKICPF 604
YI++FP +G + ++ M+ I +K+CPF
Sbjct: 83 YIIMFPPLGPLLQAIENMDRIVNKVCPF 110
>SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16)
Length = 293
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2
Query: 323 AEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRW 457
AE E C +C TE D+ L + PCKC G+TKWVH+SCL W
Sbjct: 80 AEFEYENECRICH-TEGDEVL---ISPCKCSGSTKWVHESCLVLW 120
>SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14)
Length = 270
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQ 472
C +C + L A PC+C G+ K+VHQSCL W D KQ
Sbjct: 155 CRICHGGPTTEMLIA---PCRCCGSAKYVHQSCLLMWFDRKQ 193
>SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 837
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEYI 526
C +C D+ + PC C G+ ++VHQ+CLQRW+ + + T+K C C E+I
Sbjct: 670 CRICHCEAEPDQ--PLISPCHCSGSLQYVHQTCLQRWI----KSSDTKK--CELCNYEFI 721
Query: 527 V 529
+
Sbjct: 722 M 722
>SB_5525| Best HMM Match : zf-C3HC4 (HMM E-Value=6.2e-12)
Length = 389
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 275 NECHGTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQR 454
N C + + + ++ + +C +C + L + PC C+GT ++VH SCL
Sbjct: 144 NICELENTTQEARAEIPDELDGDACRICHCGGESEVL---ISPCLCMGTVRFVHHSCLMD 200
Query: 455 WVDEKQRGNITRKVLCL 505
W+ QR T+ LCL
Sbjct: 201 WL---QRCVKTKCELCL 214
>SB_27393| Best HMM Match : zf-C3HC4 (HMM E-Value=4.8e-18)
Length = 391
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
C +C + D+ L C+C GT K+ HQ+C+ W+ + GN C CK +Y
Sbjct: 176 CRICHGGDEDEPLMV---TCRCTGTVKYAHQNCVLNWISKS--GN----QYCELCKYKY 225
>SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14)
Length = 390
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 290 TSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRW 457
T +S + + AE +N C +C + ++ L V PC C G+ K+VH +CL W
Sbjct: 185 TEMSDRGSWEVAETQNI--CRICHSA-GEEPL---VTPCHCSGSAKFVHATCLLTW 234
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 395 VQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY---IVVFPSMGAFVAML 565
++PC C GT + H+SC+++W+ +T K C C+ + V+ P A +
Sbjct: 81 IKPCLCNGTLGYAHRSCMEQWL------TLTEKKKCTICEFTFKTKTVLKPITQADICFR 134
Query: 566 DAMEEI 583
A EE+
Sbjct: 135 LAQEEL 140
>SB_23195| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-10)
Length = 466
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 335 NAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCK 514
++ SC +C + A + + PC C GT VH CL+ W+ + C CK
Sbjct: 103 SSDSCRICRDSTAGCDV---ISPCHCSGTLGRVHVRCLEEWLSASNKNE------CEICK 153
Query: 515 AEY 523
EY
Sbjct: 154 YEY 156
>SB_23318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.9 bits (64), Expect = 1.7
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 374 DDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRG 478
++++ W Q +C+ ++WV S W+ E + G
Sbjct: 305 EEQMCGWEQRSRCVDGSRWVDGSRADEWMGEVRMG 339
>SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 396 YNRVNVSEQQNGFISHVSKDGSMRSSGATSH 488
Y+R +NG++ H+ KDG R SG TSH
Sbjct: 5 YSRQGQLYCKNGYLIHIDKDG--RISGTTSH 33
>SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7)
Length = 783
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 230 CCCGGTV*NIMSGESNECHGTSVSSSQALQPAEDENAKSCWVCFATEAD 376
C G + ++ S CH + +++ + P EDE C VC D
Sbjct: 398 CDQGNSRLRVVDVSSLFCHASRIAADDEVSPNEDEECAVCRVCKVAVTD 446
>SB_16535| Best HMM Match : ShTK (HMM E-Value=2.2e-18)
Length = 101
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 344 SCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSC 445
SC +C + + + A W +C +++HQ+C
Sbjct: 61 SCGICVCGDNNPECAKWATQGECSRNARFMHQNC 94
>SB_12797| Best HMM Match : HECT (HMM E-Value=0)
Length = 749
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 74 SISEALAKQLLNCDNKKDISEYYKNKSTTFHYIRRCL 184
SI AL L+N + ++ YKN S HYI + L
Sbjct: 208 SIENALLNALVNLSPELEVEVRYKNPSANPHYINQFL 244
>SB_31555| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1063
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 233 CCGGTV*NIMS-GESNECHGTSVSSSQ 310
CC GT+ ++ G + CHGT VS++Q
Sbjct: 347 CCHGTMVSVAQPGTRDCCHGTIVSAAQ 373
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 194 THLSLKRKLQKYCCCGGTV*NIMSGESNECHGTSVSSSQ 310
T +S+ + + CC G V G + CHGT VS++Q
Sbjct: 351 TMVSVAQPGTRDCCHGTIVSAAQPGTRDCCHGTFVSAAQ 389
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 28 NRYVPTYLLNEIKMIFNFRSLGETAVE 108
+ YV T+L + I +IF ++ GE AVE
Sbjct: 1579 SEYVSTHLHDWIDLIFGYKQRGEKAVE 1605
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,186,890
Number of Sequences: 59808
Number of extensions: 425383
Number of successful extensions: 1117
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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