Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0518
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.25 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   1.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.3  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +2

Query: 41  LPTYLMKSK*FSISEALAKQLLNCDNKKDI-SEYYKNKSTTFHYIRRCLRLATHLSLKRK 217
           +PTYL+K K + +     + + N  N  DI  E+ +N+       +R +    +     K
Sbjct: 258 VPTYLIKWKNWDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKVNFYPNNQDIEK 317

Query: 218 LQKYCCCGGTV*NIMSGESN 277
              Y   GG     +S ESN
Sbjct: 318 FLNYLKRGGKTLTSISVESN 337


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 466 LIDPSLET*LMNPFCCSDTF 407
           LIDPSLE   M P C +  F
Sbjct: 104 LIDPSLEDEFMGPKCAAFLF 123


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 254 NIMSGESNECHGTSVS 301
           N MSG+ N+ HGT  S
Sbjct: 118 NHMSGDRNDAHGTGNS 133



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 529 RVSVHGCLRSHARCYGRDHPQ 591
           R   HG   S A  Y  D+PQ
Sbjct: 124 RNDAHGTGNSRANTYNFDYPQ 144


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 77  ISEALAKQLLNCDNKKDISEYYKNKSTTF 163
           +S + +K LL     KD+ +  K K T+F
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSF 29


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 272  SNECHGTSVSSSQALQ 319
            SN+C G S++ +++LQ
Sbjct: 1631 SNQCEGDSLNVAKSLQ 1646


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 77  ISEALAKQLLNCDNKKDISEYYKNKSTTF 163
           +S + +K LL     KD+ +  K K T+F
Sbjct: 17  LSSSDSKSLLKKYLSKDVFDQLKTKKTSF 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,702
Number of Sequences: 438
Number of extensions: 3822
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)