Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0518
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02610.1 68414.m00211 zinc finger (C3HC4-type RING finger) fa... 49 2e-06
At2g22120.1 68415.m02626 zinc finger (C3HC4-type RING finger) fa... 48 6e-06
At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger) fa... 46 2e-05
At2g01275.1 68415.m00041 zinc finger (C3HC4-type RING finger) fa... 45 5e-05
At1g11020.1 68414.m01264 zinc finger (C3HC4-type RING finger) fa... 43 1e-04
At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At3g47550.6 68416.m05176 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g47550.5 68416.m05174 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g47550.4 68416.m05172 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g47550.3 68416.m05175 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g47550.2 68416.m05173 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g47550.1 68416.m05171 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger) fa... 42 4e-04
At1g50440.2 68414.m05654 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At1g50440.1 68414.m05653 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At3g61460.1 68416.m06883 zinc finger (C3HC4-type RING finger) fa... 32 0.26
At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger) fa... 32 0.34
At3g52100.1 68416.m05717 PHD finger family protein contains Pfam... 31 0.45
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 31 0.79
At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger) fa... 31 0.79
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 31 0.79
At5g18530.1 68418.m02191 beige/BEACH domain-containing protein c... 30 1.0
At5g24110.1 68418.m02833 WRKY family transcription factor 30 1.4
At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar t... 29 1.8
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 29 2.4
At5g24300.1 68418.m02859 starch synthase, putative similar to st... 29 2.4
At5g03800.1 68418.m00347 exostosin family protein / pentatricope... 29 3.2
At3g09760.1 68416.m01156 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At3g06330.1 68416.m00729 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 28 4.2
At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger) fa... 28 5.6
At1g34300.1 68414.m04256 lectin protein kinase family protein co... 28 5.6
At3g43920.1 68416.m04701 ribonuclease III family protein similar... 27 7.4
At4g09360.1 68417.m01545 disease resistance protein (NBS-LRR cla... 27 9.7
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 27 9.7
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 27 9.7
>At1g02610.1 68414.m00211 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 146
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQ 508
C +C EA+ A PC C GT K+ H+ C+QRW DEK GN T +CLQ
Sbjct: 20 CRICHEEEAESYFEA---PCSCSGTIKFAHRDCIQRWCDEK--GN-TICEICLQ 67
>At2g22120.1 68415.m02626 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 252
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEYI 526
C +C T+ D +A PCKC GT+K+VH+ CL W K+ C CKA Y
Sbjct: 35 CRICLETDGRDFIA----PCKCKGTSKYVHRDCLDHWRAIKEGFAFAH---CTTCKAPYY 87
Query: 527 VVFPSMG 547
+ S G
Sbjct: 88 LRVHSAG 94
>At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING
Length = 218
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQ 508
C +C E + PC C GT K+ H++C+QRW +EK GN T ++ CLQ
Sbjct: 20 CRICHEEEEESFFEV---PCACSGTVKFAHRNCIQRWCNEK--GNTTCEI-CLQ 67
>At2g01275.1 68415.m00041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 259
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 329 DENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQ 508
D + C +C + D + PC C G+ K+ H+ C+QRW +EK G+ T ++ +
Sbjct: 53 DLSMAECRICHDEDLDSNMET---PCSCSGSVKYAHRRCVQRWCNEK--GDTTCEICHQE 107
Query: 509 CKAEY 523
K +Y
Sbjct: 108 FKPDY 112
>At1g11020.1 68414.m01264 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 321
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 335 NAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCK 514
+A C +C +++ + PC C GT ++VH+SCL W K+ + C CK
Sbjct: 59 SAPCCRICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSH---CTTCK 115
Query: 515 AEY 523
A++
Sbjct: 116 AQF 118
>At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING; contains PROSITE PS00190: Cytochrome c
family heme-binding site signature
Length = 259
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 287 GTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDE 466
G S S S E + + C +C + D + PC C GT K+ H +C+QRW +E
Sbjct: 35 GVSESISAGADLCESKFVQ-CRICHDEDEDTNMDT---PCSCSGTLKFAHHNCVQRWCNE 90
Query: 467 K 469
K
Sbjct: 91 K 91
>At3g47550.6 68416.m05176 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 288
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At3g47550.5 68416.m05174 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At3g47550.4 68416.m05172 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At3g47550.3 68416.m05175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 288
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At3g47550.2 68416.m05173 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At3g47550.1 68416.m05171 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
C +C ++ L A PC C G+ K+ H+ C+QRW +EK G+IT ++
Sbjct: 69 CRICQEEDSTKNLEA---PCACNGSLKYAHRKCVQRWCNEK--GDITCEI 113
>At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 307
Score = 41.5 bits (93), Expect = 4e-04
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 356 CFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEK 469
C + +D + PC C G+ K+ H+ C+QRW +EK
Sbjct: 78 CRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEK 115
>At1g50440.2 68414.m05654 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKA 517
C +C +D +A PC C GT K VH+SCL W K+ + C +C+A
Sbjct: 64 CRICLDVGGEDLIA----PCNCKGTQKHVHRSCLDNWRSTKEGFAFSH---CTECRA 113
>At1g50440.1 68414.m05653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKA 517
C +C +D +A PC C GT K VH+SCL W K+ + C +C+A
Sbjct: 64 CRICLDVGGEDLIA----PCNCKGTQKHVHRSCLDNWRSTKEGFAFSH---CTECRA 113
>At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 275
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
PC C G+ K+ H+ C+QRW +EK GNI +C C Y
Sbjct: 58 PCACSGSLKYAHRKCVQRWCNEK--GNI----ICEICHQPY 92
>At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
PC C G+ K+ H+ C+QRW +EK GNI +C C Y
Sbjct: 58 PCACSGSLKYAHRKCVQRWCNEK--GNI----ICEICHQPY 92
>At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
PC C G+ K+ H+ C+QRW +EK GNI +C C Y
Sbjct: 58 PCACSGSLKYAHRKCVQRWCNEK--GNI----ICEICHQPY 92
>At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
PC C G+ K+ H+ C+QRW +EK GNI +C C Y
Sbjct: 58 PCACSGSLKYAHRKCVQRWCNEK--GNI----ICEICHQPY 92
>At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQCKAEY 523
PC C G+ K+ H+ C+QRW +EK GNI +C C Y
Sbjct: 58 PCACSGSLKYAHRKCVQRWCNEK--GNI----ICEICHQPY 92
>At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 260 MSGESNECHGTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQ 439
M ES + + + E+++ S C + + + PC C G+ K+ H+
Sbjct: 25 MRTESPADNAIDIYDGDTTENEEEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHR 84
Query: 440 SCLQRWVDEK 469
C+QRW +EK
Sbjct: 85 KCVQRWCNEK 94
>At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 260 MSGESNECHGTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQ 439
M ES + + + E+++ S C + + + PC C G+ K+ H+
Sbjct: 25 MRTESPADNAIDIYDGDTTENEEEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHR 84
Query: 440 SCLQRWVDEK 469
C+QRW +EK
Sbjct: 85 KCVQRWCNEK 94
>At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 1092
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 TSVSSSQALQPAEDENAKSCWVCFAT-EADDKLAAWVQPCKCIGTTKWVHQSCLQRWVD 463
++ + S+ + EDE C +C +AD+ L PC C G+ K+VHQ CL +W++
Sbjct: 50 STATGSRYVDDDEDEE-DVCRICRNPGDADNPLR---YPCACSGSIKFVHQDCLLQWLN 104
>At3g61460.1 68416.m06883 zinc finger (C3HC4-type RING finger)
family protein (BRH1) identical to BRH1 RING finger
protein [Arabidopsis thaliana] GI:4689366; identical to
cDNA BRH1 RING finger protein, GI:4689365
Length = 170
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 308 QALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQR 475
+ L + ++ ++C VC ++ W++ C+ I H+SCL RW+D Q+
Sbjct: 81 EELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHI-----FHRSCLDRWMDHDQK 131
>At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger)
family protein various predicted proteins, Arabidopsis
thaliana ; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 462
Score = 31.9 bits (69), Expect = 0.34
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 332 ENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQC 511
E C +C +D+ A+ C C G H++C +W K GNIT C C
Sbjct: 242 EEEAVCRICMVEMEEDE-EAFKMECMCKGELALAHKTCTIKWFTIK--GNIT----CDVC 294
Query: 512 KAE 520
K E
Sbjct: 295 KQE 297
>At3g52100.1 68416.m05717 PHD finger family protein contains Pfam
profile PF00628: PHD-finger
Length = 696
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 344 SCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGN 481
+C +C+ E A + CKC G K H++C++ W + N
Sbjct: 161 TCHMCYLVEVGKSERAKMLSCKCCG--KKYHRNCVKSWAQHRDLFN 204
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 30.7 bits (66), Expect = 0.79
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 308 QALQPAEDENAKSCWVCFATEADDKLAAW----VQPCKCIGTTKWVHQSCLQRWVDEKQR 475
Q ++P+ D + +SC +CF +D + +Q KC+ + HQ C+ +W+ +
Sbjct: 147 QTVEPSMDSD-ESCSICFEKLSDSLSETYHNSIIQMPKCLHS---FHQKCIFKWIGRQNS 202
Query: 476 GNITRKV 496
+ R+V
Sbjct: 203 CPLCRRV 209
>At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger)
family protein predicted proteins, Arabidopsis thaliana
; contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 411
Score = 30.7 bits (66), Expect = 0.79
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 272 SNECHGTSVSSSQALQPAED--ENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSC 445
SNE +G ++ A + E+ E C +C + ++ C C G + VH+ C
Sbjct: 176 SNEANGDQITPVPAEETEEEIPEEEAVCRICL--DVCEEGNTLKMECSCKGDLRLVHEHC 233
Query: 446 LQRWVDEK 469
+W K
Sbjct: 234 AIKWFSTK 241
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQ 508
C VC + AD A + C W H C+ W+ I RK +CL+
Sbjct: 88 CVVCLSELADGDKARVLPSCD-----HWFHVECIDSWLQSNSTCPICRKRVCLK 136
>At5g18530.1 68418.m02191 beige/BEACH domain-containing protein
contains 5 WD-40 repeats (PF00400); contains
Beige/BEACH domain (Pfam PF02138); FACTOR ASSOCIATED
WITH N-SMASE ACTIVATION (FAN) (SP:Q92636) Homo
sapiens;similar to Lipopolysaccharide-responsive and
beige-like anchor protein (CDC4-like protein)
(Beige-like protein) (SP:P50851) [Homo sapiens}
Length = 909
Score = 30.3 bits (65), Expect = 1.0
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Frame = +2
Query: 149 KSTTFHYIRRCLRLATHLSLKRKLQKYCCCGGTV*NIMSGESNECHGTSVSSSQALQPAE 328
+ST+ +I LR H L + + K+ + + ES+EC S S SQA + +
Sbjct: 61 ESTSSQFILEYLRKDEHGCLAKYVDKFVVKDREGNSNDAVESDECLDCSTSGSQATEDDD 120
Query: 329 DEN----AKSC-----WVCFATEADDKLAAWVQPCKCIGTTKWV---HQSC--------L 448
EN + +C + C+ T A A ++ C K H C L
Sbjct: 121 TENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPEDQILASL 180
Query: 449 QRWVDEKQRGNITRKVLCL 505
R +D K G T LCL
Sbjct: 181 HRLIDGKSSGQATHSFLCL 199
>At5g24110.1 68418.m02833 WRKY family transcription factor
Length = 303
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 374 LPL*RSRPNKTW-HFHLQLAAKLV-NY*RWFHDTH*IHPTLCSTPFHHNNNIF 222
+P+ PN+T H +L + + V NY H H +H L STP NNN +
Sbjct: 182 MPIQNLEPNQTQEHGNLDMVKESVDNYNHQAHLHHNLHYPLSSTPNLENNNAY 234
>At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 917
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 330 MKMPSLVGSASLQRQTINSRRGYNRVNVSEQQNGF 434
M P+L S+S+QR T+ S +R V++++NGF
Sbjct: 83 MMKPALPSSSSVQRSTLKSPLRDDRSVVAKERNGF 117
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 308 QALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWV 460
Q + E+E +K+C +C ++L+ C+ T H+ CL +W+
Sbjct: 143 QEMSQGEEEESKTCAICL-----EELSTSDDYCELPNCTHCFHEPCLTQWL 188
>At5g24300.1 68418.m02859 starch synthase, putative similar to
starch synthase I-1 GI:9369334 from [Triticum aestivum]
Length = 652
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 601 WTYLVGDLFHSIEHGYEGTHGRKHDNVFRFTLKAENLACDVAPLLL 464
W ++ +H + Y + G DN FRFTL + AC+ APL+L
Sbjct: 228 WVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLC-HAACE-APLVL 271
>At5g03800.1 68418.m00347 exostosin family protein /
pentatricopeptide (PPR) repeat-containing protein
contains Pfam profiles: PF03016 exostosin family,
PF01535 PPR repeat
Length = 1388
Score = 28.7 bits (61), Expect = 3.2
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 185 RLATHLSLKRKLQKYCCCGGTV*NIMSGESNECHGTSVSSSQALQPAEDENAKSCWVCFA 364
+L + LSL RK ++ ++ ++ +EC +S SSS + E E+ +S F
Sbjct: 26 KLLSSLSLYRKPERLFALSASL-SLSPATIHECSSSSSSSSSSFDKEETEDIESVIDGFF 84
Query: 365 TEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGN-ITRKVLCLQCKAEYIVVFPS 541
+L+A + TK VH S L+ ++ + GN + L L E I+VF S
Sbjct: 85 YLL--RLSAQYHD---VEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVS 139
Query: 542 MGA 550
+ +
Sbjct: 140 LSS 142
>At3g09760.1 68416.m01156 zinc finger (C3HC4-type RING finger)
family protein ; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 491
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 323 AED--ENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKV 496
AED E C +C +D A+ C C G H+ C +W K GN T
Sbjct: 256 AEDVPEEEAVCRICLVELGEDS-EAFKMECLCRGELALAHKECTIKWFTIK--GNRT--- 309
Query: 497 LCLQCKAE 520
C CK E
Sbjct: 310 -CDVCKQE 316
>At3g06330.1 68416.m00729 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING ; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 260 MSGESNECHGTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQ 439
+S E++ +SV + + +E A C +C + ++ C C G + VH+
Sbjct: 190 VSSETSADQVSSVPPEETDEEIPEEEAV-CRICL--DVCEEGNTLKMECSCKGDLRLVHE 246
Query: 440 SCLQRWVDEK 469
+C +W K
Sbjct: 247 ACAMKWFSTK 256
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = +2
Query: 347 CWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVLCLQ 508
C +C D++ W+ PC + H +C+ W+ + + R L L+
Sbjct: 120 CAICLCEFEDEEPLRWMPPC-----SHTFHANCIDEWLSSRSTCPVCRANLSLK 168
>At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 276
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 281 CHGTSVSSSQALQPAEDENAKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWV 460
C+G + + E+ SC VC+ D AA V C G T +H C ++ +
Sbjct: 139 CYGMGLRDKHSC--IENSTKNSCPVCYEYLFDSVKAAHVMKC---GHT--MHMDCFEQMI 191
Query: 461 DEKQ 472
+E Q
Sbjct: 192 NENQ 195
>At1g34300.1 68414.m04256 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 829
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 509 CKAEYIVVFPSMGAFVAMLDAMEEITHKICP 601
C E + P+MG V ML+ + EI + +CP
Sbjct: 738 CIQEQPLQRPTMGKVVQMLEGITEIKNPLCP 768
>At3g43920.1 68416.m04701 ribonuclease III family protein similar to
RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana]
GI:6102610; contains Pfam profiles PF02170: PAZ domain,
PF00636: RNase3 domain
Length = 1531
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 351 GSASLQRQTINSRRGYNRVNVSEQQNGFISHVSKDGSMRSSGATSHARFSAFSV 512
G S QRQ+I S +R+ S + G+I ++G+ T+ +FS F V
Sbjct: 1001 GQLSRQRQSIISNSNLHRLTTSRKLQGYI----RNGAFEPRRWTAPGQFSLFPV 1050
>At4g09360.1 68417.m01545 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 853
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -3
Query: 432 THFVVPIHLHGCTHAASLSSASVAKQTQQDLAFSSSAGCKACELLTLVP*HSLDSPDIMF 253
+HF IHL +H ++ +L + GC + E + L P HS+ D+
Sbjct: 617 SHFSNLIHLDLSSH--DFEKLKSVEELPLNLKHLYAHGCDSLESVDLSPKHSIKHLDLSH 674
Query: 252 -YTVPPQQQYFCSFLFKERCVANLRQR 175
+ + +Q FL ++C + QR
Sbjct: 675 CFGLQQDEQQITQFL-NDKCSQEVSQR 700
>At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 338 AKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVL 499
++ C +C T L + C H CLQRW+D K R+ L
Sbjct: 506 SRDCVICMTTI---DLRHRINDCMVTPCEHIFHSGCLQRWMDIKMECPTCRRPL 556
>At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 338 AKSCWVCFATEADDKLAAWVQPCKCIGTTKWVHQSCLQRWVDEKQRGNITRKVL 499
++ C +C T L + C H CLQRW+D K R+ L
Sbjct: 506 SRDCVICMTTI---DLRHRINDCMVTPCEHIFHSGCLQRWMDIKMECPTCRRPL 556
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,662
Number of Sequences: 28952
Number of extensions: 296580
Number of successful extensions: 877
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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