Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0516
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   4.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 102 YFCRSKFVNSFYFISY 55
           Y   + F+N+FYFI +
Sbjct: 287 YIILTSFLNNFYFIIF 302


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 147 IKMNFVIPFVSLLLW 191
           +KM  VI FV +L W
Sbjct: 285 VKMTLVIVFVFVLCW 299


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 477 PHHCIKVQH 451
           PHH IK+QH
Sbjct: 105 PHHEIKLQH 113


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKFIITYIEQTL 210
           F+ +F+  +  L  F++ L ILL +     FFF+ +F +   T+  Q L
Sbjct: 297 FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT-QFSEGFSTHQIQVL 344


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKFIITYIEQTL 210
           F+ +F+  +  L  F++ L ILL +     FFF+ +F +   T+  Q L
Sbjct: 297 FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT-QFSEGFSTHQIQVL 344


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKFIITYIEQTL 210
           F+ +F+  +  L  F++ L ILL +     FFF+ +F +   T+  Q L
Sbjct: 297 FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT-QFSEGFSTHQIQVL 344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKFIITYIEQTL 210
           F+ +F+  +  L  F++ L ILL +     FFF+ +F +   T+  Q L
Sbjct: 297 FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT-QFSEGFSTHQIQVL 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,890
Number of Sequences: 336
Number of extensions: 1748
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)