Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0516
         (480 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-3|AAB42224.2|  363|Caenorhabditis elegans Hypothetical pr...    37   0.007
AF067950-1|AAG24154.1|  361|Caenorhabditis elegans Serpentine re...    30   0.76 
AF068717-3|AAC17762.2|  361|Caenorhabditis elegans Serpentine re...    30   1.00 
AC024214-15|AAM97983.1|  544|Caenorhabditis elegans Hypothetical...    29   2.3  
AC024214-14|AAU87808.1|  644|Caenorhabditis elegans Hypothetical...    29   2.3  
AF000191-1|AAB52884.1|  533|Caenorhabditis elegans Hypothetical ...    28   3.1  
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z29094-4|CAA82344.2|  507|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    27   7.0  
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical...    27   7.0  
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ...    27   7.0  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    27   7.0  
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical...    27   7.0  
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z68341-3|CAA92766.2|  269|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AC006605-2|AAL00853.1|  139|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U88167-3|AAB42224.2|  363|Caenorhabditis elegans Hypothetical
           protein D2092.4 protein.
          Length = 363

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 288 KQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRHGVALLY 467
           K  C TC +    VE + +D +       VKT +  +AR    +  P+L++YR    +LY
Sbjct: 104 KVPCPTCTEALSEVEEIDDDIEATGYVQVVKTNDRSVARELGINVFPSLVYYRRKNPILY 163

Query: 468 SGE 476
            G+
Sbjct: 164 DGD 166


>AF067950-1|AAG24154.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein141 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 195 YTKVKGIQTVLQNSF*FQMVKAIYVL*YFYKYF-CRSKFVNSFYFISYIKKP 43
           Y K K    +    F  Q++K +  + YF  +F   S F+N F+F+  I+KP
Sbjct: 11  YPKFKTATAISLCKFETQLLKTVDRVLYFEPHFSAASIFINLFHFLILIRKP 62


>AF068717-3|AAC17762.2|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein142 protein.
          Length = 361

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 195 YTKVKGIQTVLQNSF*FQMVKAIYVL*YFYKYF-CRSKFVNSFYFISYIKKP 43
           Y K K    +    F  Q++K +  + YF  +F   S F+N F+F+  I+KP
Sbjct: 11  YPKFKTATAISLCKFETQLLKIVDRVLYFEPHFSAASIFINLFHFLILIRKP 62


>AC024214-15|AAM97983.1|  544|Caenorhabditis elegans Hypothetical
           protein Y77E11A.12a protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKF 237
           FL V+   + +LF F TC+         +LFF +Y F+KF
Sbjct: 225 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTYLFEKF 264


>AC024214-14|AAU87808.1|  644|Caenorhabditis elegans Hypothetical
           protein Y77E11A.12b protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 356 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKF 237
           FL V+   + +LF F TC+         +LFF +Y F+KF
Sbjct: 325 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTYLFEKF 364


>AF000191-1|AAB52884.1|  533|Caenorhabditis elegans Hypothetical
           protein T23C6.3 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 282 FTKQNCE---TCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKE 425
           +TK+N +   TC+KL   + ++   FK+    MSV+TV   +  +    +E
Sbjct: 82  YTKRNRDEIVTCQKLFSEITAIMRRFKQLTEEMSVETVEVKIKSMIKDCQE 132


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +3

Query: 300 ETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARL---YNPSKEPALI 437
           E  + +  H+E L  + K+ +NAM++   +S LAR    +NP K   +I
Sbjct: 113 ELMRGVRAHIEDLLAEHKEEMNAMNLAVAHS-LARYKVKFNPEKIDTMI 160


>Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical
           protein C32C4.7 protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 395 MTIYSLNAHSI*VFLKVFL*TF-YMLFQFLTCLTILL 288
           M+ +SLN   I +FL VFL    Y LF FL  L  LL
Sbjct: 484 MSFFSLNMIDIFLFLGVFLAILVYFLFTFLRLLLNLL 520


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +3

Query: 285  TKQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSH---LARLYNPSKEPALI 437
            T +  E C  LE+HV  L   F K ++   V  +NSH     R   P   P ++
Sbjct: 856  TGKTLEKCSNLEKHVREL---FPKRISRPLVTDLNSHSTVCTRYLRPIAPPQIV 906


>Z29094-4|CAA82344.2|  507|Caenorhabditis elegans Hypothetical
           protein C07A9.6 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 FTKQNCETCKKLEQHVESLQEDFKK 356
           F     E C+++ +H ES+ EDF+K
Sbjct: 110 FKDMRVEACEQMLRHDESVYEDFRK 134


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +3

Query: 282 FTKQNCETCK-----KLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYR 446
           FT +N ET +     K+ Q++E  Q            +  N  L  LYN  KE  L+ +R
Sbjct: 778 FTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKDCRFTNEELEALYNVVKEEHLLSWR 837

Query: 447 HGVALLYSGE 476
           H + +   G+
Sbjct: 838 HRLGVSARGK 847


>Z68341-3|CAA92766.2|  269|Caenorhabditis elegans Hypothetical
           protein F01G4.5 protein.
          Length = 269

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 374 AHSI*VFLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFF-SYKFQKFII 231
           A S+ V L   L T ++ F    CL + +S     L+FF ++ FQ F +
Sbjct: 193 ATSLFVILLFILPTIFVYFVVFRCLRLAVSALQTVLYFFATWPFQLFAL 241


>U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical
           protein T16A1.8 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 16/67 (23%), Positives = 27/67 (40%)
 Frame = +3

Query: 30  VKRQMVFLYN**SKKS*QTYFYKNTYKNIKAHKLLLPFEIKMNFVIPFVSLLLWCNNVRS 209
           + R   F++   SKK+           N+K  KL  P  +     +P  +   W +++ S
Sbjct: 55  IVRSSEFIFTLQSKKNYYDLHINFKLSNVKISKLFFPGHVFTTISVPEFTAKQWIDHIGS 114

Query: 210 QSLLNVS 230
             L N S
Sbjct: 115 VFLKNAS 121


>AC006605-2|AAL00853.1|  139|Caenorhabditis elegans Hypothetical
           protein C07H6.9 protein.
          Length = 139

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 46  FFYITNEVKRVNKLTSTKILIKILKHINCF 135
           +F   N V+R+N +T T   IK++  ++CF
Sbjct: 51  YFISYNGVQRLNVITITTNFIKMVVDVSCF 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,780,128
Number of Sequences: 27780
Number of extensions: 146455
Number of successful extensions: 435
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)