Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0515
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.87 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.87 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 421 WIWWLIFQFVISE 459
           WIW LIF ++I E
Sbjct: 121 WIWLLIFAYLIPE 133


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 421 WIWWLIFQFVISE 459
           WIW LIF ++I E
Sbjct: 121 WIWLLIFAYLIPE 133


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +2

Query: 17  EGCKSSCKRTGCKINTTKETVEEDFAVIN 103
           EGCKS   RT   I++  E       VIN
Sbjct: 23  EGCKSFFGRTYNNISSISECKNNGECVIN 51


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 415 IIWIWWLIFQFVISE 459
           + W+W LIF F + +
Sbjct: 129 VAWMWCLIFAFWVPQ 143


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 415 IIWIWWLIFQFVISE 459
           + W+W LIF F + +
Sbjct: 129 VAWMWCLIFAFWVPQ 143


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 415 IIWIWWLIFQFVISE 459
           + W+W LIF F + +
Sbjct: 129 VAWMWCLIFAFWVPQ 143


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 415 IIWIWWLIFQFVISE 459
           + W+W LIF F + +
Sbjct: 129 VAWMWCLIFAFWVPQ 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,238
Number of Sequences: 336
Number of extensions: 2553
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)