Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0515
(497 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 57 9e-09
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 55 3e-08
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 53 1e-07
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 46 2e-05
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 44 9e-05
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 43 2e-04
08_02_1602 - 28148255-28149413,28151927-28152087 31 0.51
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 31 0.68
03_02_0872 - 11983151-11983432,11983488-11983598,11983744-119840... 31 0.68
01_06_1495 + 37769982-37771496 30 1.2
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 29 1.6
12_02_1060 - 25752181-25754229 27 6.3
08_01_0815 - 7914634-7914740,7915262-7915357,7922268-7922328,792... 27 8.4
07_03_0964 - 22989470-22989618,22989729-22990476 27 8.4
01_07_0378 - 43167805-43169152,43169258-43169326,43169473-431695... 27 8.4
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 56.8 bits (131), Expect = 9e-09
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = +3
Query: 150 KLINWMMFSK*WPTGDYKLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSYV-VDVNLIIG 326
KL+N +FS+ K++ GNT GVY + IDI + EL + V D + IG
Sbjct: 147 KLVNSGLFSE----SSVKVVVGNTSTGVYKDQDLYDKYIDIAGIPELSAIVRKDKGIEIG 202
Query: 327 AGTSLADMMELF---LKLSSSNEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNLMLKH 488
A TS++ +E+ +L+SS + +HM VA VRN +I GN++L H
Sbjct: 203 AATSISRTIEILNQESELTSSPNGSVVFRKLAEHMSKVASPFVRNTASIGGNIILAH 259
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 55.2 bits (127), Expect = 3e-08
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +3
Query: 150 KLINWMMFSK*WPTGDYKLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSYV-VDVNLIIG 326
KL+N +FS+ K++ GNT GVY + IDI + EL + V D + IG
Sbjct: 262 KLVNSGLFSE----SSVKVVVGNTSTGVYKDQDLYDKYIDIAGIPELSAIVRKDKGIEIG 317
Query: 327 AGTSLADMMELFLKLSSSNEEFR---YLKHFHDHMDLVAHIPVRNIGTIAGNLMLKH 488
A TS++ +E+ + S S + +HM VA VRN +I GN++L H
Sbjct: 318 AATSISRTIEILNQESESTSSPNGSVVFRKLAEHMSKVASPFVRNTASIGGNIILAH 374
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 52.8 bits (121), Expect = 1e-07
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 KLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSYVVDVNLI-IGAGTSLADMMELFLKLSS 377
K++ GNT GVY ID+ + EL S DV + IGA S++ ++E+ +
Sbjct: 297 KVVVGNTSSGVYRDAELYDRYIDLRAIPELNSVSKDVKGVGIGAAMSISQVIEILRGEGN 356
Query: 378 SNEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNLML 482
S ++ + K DHM+ VA VRN+ ++ GNL++
Sbjct: 357 SYKDVVFCK-IADHMEKVASQFVRNMASLGGNLIM 390
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 KLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSYVVDVNLI-IGAGTSLADMMELFLKLSS 377
K++A NTG GVY + I+I + EL + N I IGA S++ +E+
Sbjct: 267 KIVASNTGSGVYKDQDLHDKYINISQIPELSAINRSSNGIEIGAAVSISKAIEILRSDGG 326
Query: 378 SNEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNLML 482
FR + + H+ VA VRN TI GN+++
Sbjct: 327 DAVVFRKIAY---HLGKVASPFVRNTATIGGNIIM 358
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 KLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSY-VVDVNLIIGAGTSLADMMELFLKLSS 377
K++A NTG GVY + I+I + EL + + IGA S++ +++ LS
Sbjct: 276 KIVASNTGSGVYKDQDLHDKYINISQIPELSAINRSSKGVEIGAVVSISQAIDI---LSD 332
Query: 378 SNEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNLML 482
FR + DH+ VA VRN TI GN+++
Sbjct: 333 GGAVFRKIA---DHLSKVASPFVRNTATIGGNIIM 364
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 KLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSY-VVDVNLIIGAGTSLADMMELFLKLSS 377
K++A NTG GVY + I+I + EL + + IGA S++ +E+ LS
Sbjct: 275 KIVASNTGSGVYKDQDLHDKYINISQILELSAINRSSKGVEIGAVVSISKAIEI---LSD 331
Query: 378 SNEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNLML 482
FR + DH+ VA V+N TI GN+++
Sbjct: 332 GGAVFRKIA---DHLSKVASSFVQNTATIGGNIIM 363
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 26 KSSCKRTGC-KINTTKETVEEDFAVINDSKTIEIDCGTHKW 145
K+ KR+ C K+ + F+V++D +T E CG H+W
Sbjct: 338 KNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHEKHCGDHRW 378
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 30.7 bits (66), Expect = 0.68
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 390 ILRWSWRALETIPSYPPRR 334
+L+ WR LE IPSY PR+
Sbjct: 734 VLKMKWRMLEKIPSYDPRK 752
>03_02_0872 -
11983151-11983432,11983488-11983598,11983744-11984007,
11984038-11984163,11984257-11984481,11984757-11985311,
11985390-11985695,11985815-11986369
Length = 807
Score = 30.7 bits (66), Expect = 0.68
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 390 ILRWSWRALETIPSYPPRR 334
+L+ WR LE IPSY PR+
Sbjct: 718 VLKMKWRMLEKIPSYDPRK 736
>01_06_1495 + 37769982-37771496
Length = 504
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 26 KSSCKRTGC-KINTTKETVEEDFAVINDSKTIEIDCGTHKW 145
K+ KR+ C K T + F+VI D KT E CG KW
Sbjct: 339 KNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKW 379
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 390 ILRWSWRALETIPSYPPRRFRH 325
+L+ WR L+ +PSYPP H
Sbjct: 681 VLKQKWRILKYVPSYPPETQTH 702
>12_02_1060 - 25752181-25754229
Length = 682
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 356 FHHIRQGGSGTNNQIDIHNVALQFANIKNINDIRW 252
F + G TN +D+ + L N+ +ND RW
Sbjct: 135 FSELTTYGGNTNVSLDVDDTNLYVENMTAMNDTRW 169
>08_01_0815 -
7914634-7914740,7915262-7915357,7922268-7922328,
7922365-7923621
Length = 506
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 279 VSELKSYVVDVNLIIGAGTSLADMMELFLKLSSSNEEFRYLKHFHDH 419
+S L +VDV + + +G + D +E +S + E ++ F+D+
Sbjct: 181 ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDY 227
>07_03_0964 - 22989470-22989618,22989729-22990476
Length = 298
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 279 VSELKSYVVDVNLIIGAGTSLADMMELFLKLSSSNEEFRYLKHFHDH 419
+S L +VDV + + +G + D +E +S + E ++ F+D+
Sbjct: 36 ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDY 82
>01_07_0378 -
43167805-43169152,43169258-43169326,43169473-43169544,
43169677-43169745,43169979-43171161,43171239-43171365
Length = 955
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 339 LADMMELFLKLSSSNEEFRYLKHFHDHMDLVAHIPVRNIGTIAG 470
L D E+ +K++SSNE + K + + L++ I RN+ G
Sbjct: 637 LGDGREIAVKVASSNESIQGKKQLANEVALLSRIHHRNLVAFLG 680
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,560,134
Number of Sequences: 37544
Number of extensions: 275563
Number of successful extensions: 563
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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