Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0515
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p...    28   3.3  
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p...    28   3.3  
U64833-6|AAK95861.1|  350|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical ...    27   7.6  
AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
           protein F55B11.1 protein.
          Length = 1358

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
 Frame = +3

Query: 201 KLIAGNTGQGVYHIKGYPTNVIDIFNVSELK----SYVVDVNLIIGAGTSLADMMELFLK 368
           +LI+GN+   +  +K    ++  + N  ++K     ++ +  + +G G SL DM    ++
Sbjct: 283 RLISGNSELAI-ELKFRFIDLPAVINPRQVKVLHEKHLENDGVYMGTGMSLTDMDNYSVQ 341

Query: 369 LSSS--NEEFRYLKHFHDHMDLVAHIPVRNIGTIAGNL 476
           L      E+   LKH H+ +   A I VRN+ ++AGN+
Sbjct: 342 LMKDLPREQTAVLKHVHEMLHWFAGIHVRNVASVAGNI 379


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +3

Query: 198 YKLIAGNTGQGVYHIKGYPTNVIDIFNVSELKSYVVDVNLIIGAGTSLADMMELFLKLSS 377
           +KLI G+ G GV  I+    NV  +F  ++ KS VV++    G  T +  + +    LS 
Sbjct: 502 HKLIIGSKGSGVQVIRDSHPNVSVVFPDAKSKSDVVNIR---GDKTEVDAVYKKLTALSK 558

Query: 378 SNEEFRYLKHFHDHMDLVAHI 440
              E  Y +      + + HI
Sbjct: 559 EYAENNYQQTVAIFKEFLKHI 579


>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 285 ELKSYVVDVNLIIGAGTSLADMMELFLKLSSS 380
           E KSYV+D +L++     + D  ELF + +SS
Sbjct: 246 EDKSYVIDAHLVLTPNGEVEDENELFSEFASS 277


>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 285 ELKSYVVDVNLIIGAGTSLADMMELFLKLSSS 380
           E KSYV+D +L++     + D  ELF + +SS
Sbjct: 246 EDKSYVIDAHLVLTPNGEVEDENELFSEFASS 277


>U64833-6|AAK95861.1|  350|Caenorhabditis elegans Hypothetical
           protein B0507.8 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -1

Query: 332 SGTNNQIDIHNVALQFANIKNINDIRWVTFDVVNTLSGITGNQFVIT 192
           +G    +++  +A++  N K  +D++   F+++N L  I  N+ VIT
Sbjct: 278 AGLRRNLEL-KIAIEEENNKRFSDLKDDLFNIINNLQPIAENRRVIT 323


>U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical
           protein F09C12.6 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -2

Query: 181 HFENIIQFISFKPFVSTTVN--FNCFTIINYSKVFFHRF 71
           HFE ++ FIS      T VN   N F  ++ +  F H+F
Sbjct: 260 HFEEVVSFISKPSTYFTCVNSGINIFVYLSLNAEFRHQF 298


>Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical
           protein T28B8.5 protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 193 PVGHHFENIIQFISFKPFVSTTVNFNCFTIIN 98
           P   H  N  Q++S    V T  N NC  +IN
Sbjct: 311 PAYSHASNTTQYVSCDNGVQTLSNLNCVDLIN 342


>AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical
           protein Y116F11B.5 protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -2

Query: 184 HHFENIIQF--ISFKPFVSTTVNFNCFTIINYSKV 86
           H   NII+F  + +  + S  ++F CF   +YSK+
Sbjct: 80  HMICNIIEFCPLLYNYYFSFEISFECFPFASYSKI 114


>AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical
           protein Y45F10D.14 protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 418 IWIWWLIFQFVIS 456
           +WIWW IF F IS
Sbjct: 5   LWIWWSIFGFWIS 17


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,408,772
Number of Sequences: 27780
Number of extensions: 232803
Number of successful extensions: 531
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)