Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0515
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   4.1  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   7.1  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   7.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.4  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 181 HFENIIQFISFKPF 140
           HF N+I++I+F  F
Sbjct: 2   HFNNVIKYINFDRF 15


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 403 FKYLNSSLELESFRNNSIISAKEVPAPI 320
           +KY  ++   + +  N II+ +++P P+
Sbjct: 329 YKYNYNNYNKKLYYKNYIINIEQIPVPV 356


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 363 ETIPSYPPRRFR 328
           ET+PS P R+F+
Sbjct: 69  ETLPSLPDRKFQ 80


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 363 ETIPSYPPRRFR 328
           ET+PS P R+F+
Sbjct: 71  ETLPSLPDRKFQ 82


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 204 LIAGNTGQGVYHIKGYP 254
           +I+G TG+G   +K YP
Sbjct: 93  VISGKTGKGGRLLKPYP 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,273
Number of Sequences: 438
Number of extensions: 3039
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)