Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0514
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic...    30   2.1  
AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH0731...    30   2.1  
AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB...    30   2.1  
AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA...    30   2.1  

>AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic
            GABA-B receptor subtype2 protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +2

Query: 2    RNSARGVSVSLTNGHYGRPHVVKRRSLLLETPQCNSRRTSLLTH*CFYQFITLSFDSWQT 181
            RNS+  +S S +      PH       +++TP  +  R + +       F+    D W T
Sbjct: 985  RNSSTNISTSQSELSNMCPHSKPSTPAVIKTPTASDHRRTSMGSALKSNFVVSQSDLWDT 1044

Query: 182  IYLFHAK 202
              L HAK
Sbjct: 1045 HTLSHAK 1051


>AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH07312
            protein.
          Length = 1221

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +2

Query: 2    RNSARGVSVSLTNGHYGRPHVVKRRSLLLETPQCNSRRTSLLTH*CFYQFITLSFDSWQT 181
            RNS+  +S S +      PH       +++TP  +  R + +       F+    D W T
Sbjct: 986  RNSSTNISTSQSELSNMCPHSKPSTPAVIKTPTASDHRRTSMGSALKSNFVVSQSDLWDT 1045

Query: 182  IYLFHAK 202
              L HAK
Sbjct: 1046 HTLSHAK 1052


>AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB,
            isoform B protein.
          Length = 1221

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +2

Query: 2    RNSARGVSVSLTNGHYGRPHVVKRRSLLLETPQCNSRRTSLLTH*CFYQFITLSFDSWQT 181
            RNS+  +S S +      PH       +++TP  +  R + +       F+    D W T
Sbjct: 986  RNSSTNISTSQSELSNMCPHSKPSTPAVIKTPTASDHRRTSMGSALKSNFVVSQSDLWDT 1045

Query: 182  IYLFHAK 202
              L HAK
Sbjct: 1046 HTLSHAK 1052


>AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA,
            isoform A protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +2

Query: 2    RNSARGVSVSLTNGHYGRPHVVKRRSLLLETPQCNSRRTSLLTH*CFYQFITLSFDSWQT 181
            RNS+  +S S +      PH       +++TP  +  R + +       F+    D W T
Sbjct: 985  RNSSTNISTSQSELSNMCPHSKPSTPAVIKTPTASDHRRTSMGSALKSNFVVSQSDLWDT 1044

Query: 182  IYLFHAK 202
              L HAK
Sbjct: 1045 HTLSHAK 1051


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,270,073
Number of Sequences: 53049
Number of extensions: 354644
Number of successful extensions: 571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)