Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0512
(484 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 33 0.12
02_03_0144 + 15694766-15694883,15694980-15697612 31 0.37
03_02_0481 + 8789890-8789949,8790325-8790441,8790532-8790601,879... 31 0.48
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 31 0.64
08_02_0294 - 15432424-15432669,15433007-15433099,15433168-154332... 30 1.1
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 29 1.5
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 29 2.6
11_06_0291 + 22008412-22012284 28 3.4
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592... 28 3.4
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 3.4
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134... 28 3.4
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 28 4.5
08_02_0493 - 17770723-17770758,17770772-17770996,17771051-177720... 27 7.9
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQ 395
++ARN + M+E+EN+ ++ L D++R+ L +++ + + + +D I+ +
Sbjct: 250 QIARNEQRTSQLMEELENL-EETLNDSIRESLGARTGNSNRGSHKASLEEEDD-ILSDED 307
Query: 396 GLEELESKLSAYHVMVEKEV 455
+ K S+ H E++V
Sbjct: 308 DFYDRTKKKSSSHKSSEQQV 327
>02_03_0144 + 15694766-15694883,15694980-15697612
Length = 916
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQ 395
+L R+ + S+ ++ G+ +L +AL+ ++ S+ S + R R++EE++
Sbjct: 280 ELERSLSFSDDEESLLDATGNNELNEALQFQIGSRRFSPGSKMNDASRSDPHGRLIEELE 339
Query: 396 GLEELESKLSAYHVMVEKEVLGKRD 470
+ + HV+V +V+ +RD
Sbjct: 340 RSFSDAEEAAEQHVVVVDKVITERD 364
>03_02_0481 +
8789890-8789949,8790325-8790441,8790532-8790601,
8790688-8790836,8791520-8791621,8791692-8791892,
8792589-8792651,8792791-8793009,8793681-8793755,
8794003-8794101,8794521-8794691
Length = 441
Score = 31.1 bits (67), Expect = 0.48
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 246 YTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLS 425
Y Q I + ++ D +RK+LKSK + ++D +H +S++ E L L + +
Sbjct: 154 YRYQRIRQDMESQIADVMRKQLKSK-ESSGNADNSVKLQHAESKLSELRTTLSALGREAT 212
Query: 426 AYHVMVE 446
A VE
Sbjct: 213 AAMEAVE 219
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 30.7 bits (66), Expect = 0.64
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 339 SDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKEVLGKRDAR 476
SD EYD +++D R + ++E KLS E++ + RD R
Sbjct: 61 SDDEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRR 106
>08_02_0294 -
15432424-15432669,15433007-15433099,15433168-15433251,
15434311-15434446,15434601-15434746,15435017-15435242,
15435885-15435967,15436867-15437061,15437148-15437246,
15438237-15438350,15438424-15438511,15438790-15438995,
15439306-15439358,15440473-15440776,15441278-15441366,
15441584-15441958,15442382-15442446,15442945-15442970,
15444007-15444225
Length = 948
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 249 TMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHK-DSRIMEEMQGLEELESKLS 425
T Q I+N+ D LRD ++L S +D Y+ +K SR + L+E+ K
Sbjct: 134 TSQRIQNVADIILRDPSERKLVVVSAMSKVTDMMYNLVNKAQSRDDSYITALDEVFEK-- 191
Query: 426 AYHVMVEKEVLGKRD 470
H+ K++LG D
Sbjct: 192 --HMAAAKDLLGGED 204
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 276 DKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKEV 455
DK+ ++ K+ K +SK H + KHKD + + ELE + + +
Sbjct: 108 DKERKEGKDKKDKERSKDKHRDKKDRKEKHKDKKKDKSKDKSRELEEGTERHSEALHGQK 167
Query: 456 LGKRDARS 479
+G+ +S
Sbjct: 168 VGESSRKS 175
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +3
Query: 225 RNTNNSEYTMQEIENIGD-KKLRDALRKELKSKSKR-DHSSDGEYDRKHKDSRIMEEMQG 398
R + +QE G K+ +D L K ++ + R D D + + + ++
Sbjct: 1114 RRETKASIIIQEARETGALKEAKDKLEKRVEELTWRLDVEKHLRIDLEEAKGQEISNLKS 1173
Query: 399 -LEELESKLSAYHVMVEKEVLGKRDAR 476
L+E++ KLS H +EKE K DA+
Sbjct: 1174 VLQEMQEKLSEAHAAIEKE---KEDAK 1197
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 255 QEIENIGDKKLRDALRKELKSKSKRDHSSDGEY---DRKHKDSRIMEEMQGLEE 407
++ E + DK+ RKE K++H + E +RK + ++ EE +G EE
Sbjct: 440 EQEEEMKDKEKGGEERKEEPHHEKQEHKKEKEVKEEERKEEQNKEKEEREGTEE 493
>08_02_1473 -
27358162-27358275,27358968-27359024,27359102-27359245,
27359770-27359934,27360020-27360208,27360301-27360535,
27360826-27360932,27361020-27361103,27361185-27361695,
27361793-27361854,27363373-27363456
Length = 583
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQ 395
+L R + EY + +E +K+L+ EL+ +K ++ +
Sbjct: 418 RLLREQQDDEY-LASLEADREKELKAEQEAELRRLEAAAEREAAIAKQKQEEEEKRRKQL 476
Query: 396 GLEELESKLSAYHVMVEKEVL 458
EELESKL+A + KE L
Sbjct: 477 EEEELESKLAAKQASLPKEPL 497
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 225 RNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSR-IMEEMQGL 401
R + +E+E + ++L++ +E + + +R H + E DR+ + R IM++
Sbjct: 476 RRDREKDIKYKEVERLYKERLKEWEFREREKEYQRQHEKEREKDRERERKREIMKQEDDS 535
Query: 402 EELESK 419
+E +++
Sbjct: 536 DEEDNR 541
>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
1342225-1342799,1343596-1343703,1345823-1346155,
1346783-1349306
Length = 1630
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 264 ENIGDKKLRDALRKELKSKSKRD--HSSDGEYDRKHKDSRIMEEMQGLEELESKLSA 428
+ +K + +L SK D + SD E+D D+ ++E+ Q E L +KLSA
Sbjct: 1409 DQFSEKGGTSLVNSQLSLLSKNDGLNLSDEEFDGLEDDAILVEKSQTQESLVAKLSA 1465
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 306 ELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKE 452
ELK S R SS+ E + + + + L +L KLS +H + +E
Sbjct: 606 ELKLISFRSESSELEEKLQKSQEELKDRILELSDLRDKLSGFHALEMEE 654
>08_02_0493 -
17770723-17770758,17770772-17770996,17771051-17772033,
17772196-17772720,17772801-17772990
Length = 652
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 339 SDGEYDRKHKDSRIMEEMQGLEELESKLSA 428
SD E+D H D +E +Q E L +KLSA
Sbjct: 497 SDEEFDGLHDDVIGVERVQSQESLVAKLSA 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,800,311
Number of Sequences: 37544
Number of extensions: 120216
Number of successful extensions: 499
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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