Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0512
(484 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061) 39 0.002
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 33 0.093
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 33 0.12
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14) 30 0.87
SB_8274| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15) 29 1.5
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 29 2.0
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2) 28 3.5
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19) 28 3.5
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 3.5
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 28 3.5
SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48) 28 4.6
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 6.1
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 6.1
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_23894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 27 6.1
SB_2365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 27 8.1
>SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061)
Length = 337
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 234 NNSEYTMQEIENIGD-KKLRDALRKE-LKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEE 407
NNS+ +Q++ N+GD KK +D + E K K +D D E + K + + +E+
Sbjct: 44 NNSQQNIQQVSNLGDEKKAKDTIENEDSKRKRHKDKDHDEELEVKMEKKKSKSTKVEVEQ 103
Query: 408 LESKL 422
LE +L
Sbjct: 104 LEEEL 108
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 33.5 bits (73), Expect = 0.093
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +3
Query: 258 EIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQG--------LEELE 413
E E G K D ++EL K K DH D +RK K I+E +QG L+E+E
Sbjct: 1632 EKEREGIKDNMDKYKRELFEKMKNDHEQDLTSERK-KYEEIIEALQGELSKAEVRLKEVE 1690
Query: 414 SKLSAYHVMVEKEVLGKRDARSP 482
+L + + + LG D SP
Sbjct: 1691 ERLLSALAEAKSQKLG-NDPESP 1712
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRK--------ELKSKSKRDHSSDGEYDRKHKD 371
+L R + +Q E K++ D LRK E K + K++ E R+ ++
Sbjct: 179 ELERRKHQERMEIQRREAEKVKQMMDELRKKEERRRKREEKRRKKKEEQERLEQQRRQRE 238
Query: 372 SRIMEEMQGLEELESKLSAYHVMVE--KEVLGKR 467
RI E+ + LEE + K+ + H++ E K V KR
Sbjct: 239 QRIAEKRKRLEE-QRKVESLHLLKELLKRVADKR 271
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 243 EYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEE 407
E ++++ DKK + + K K + D SSD E +R+ D IMEE++ E
Sbjct: 448 EEQKEKMKERKDKKEEKKDKDKDKDKDEEDDSSDSEEEREAMDEMIMEEIEAALE 502
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 300 RKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESK 419
+K +K K + DGE +KH+ + + G E + K
Sbjct: 109 KKVIKEKDPSEKKKDGESKKKHRSEKAKDGSDGKERSDRK 148
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 30.7 bits (66), Expect = 0.66
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 219 LARNTNNSEYTMQEIENIGDKKLRDALRKE-LKSKSKRDHSSDGEYDRKHKDSRIMEEMQ 395
L + T + T++EIE + K +D K + SK K + + RK ++ E +
Sbjct: 247 LNKITEELKSTLEEIEMVKKKGNKDLEEKVGVLSKEKSNLEKEANKYRKQRE----ETQK 302
Query: 396 GLEELESKLSAYHVMVEK 449
EEL SKLS + +EK
Sbjct: 303 TCEELASKLSKAYAEIEK 320
>SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)
Length = 1089
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 291 DALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVE 446
D LR K K R + DG DR+H ++ E + EE+E A ++E
Sbjct: 337 DKLRDRAKEKLDRVRT-DGPRDRRHLHEKVHEAKECAEEIEDNEPAVEEVIE 387
>SB_8274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 291 DALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVE 446
D LR K K R + DG DR+H ++ E + EE+E A ++E
Sbjct: 36 DKLRDRAKEKLDRVRT-DGPRDRRHLHEKVHEAKECAEEIEDNEPAVEEVIE 86
>SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15)
Length = 481
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 213 AKLARNTNNSEYTMQEIENIGDKKL---RDALRKELKSKSKRDHSSDGEYDRKHKDSRIM 383
++L + SE ++E+ + D + + ++E S R SDGE RK I+
Sbjct: 74 SELRHRLDESEKLVRELREVLDSRFPVGETSSQEEYSELSTR--ISDGEEARKEMKEEII 131
Query: 384 EEMQGLEELESKLSAYHVMVEKE 452
+Q +E+E KL +E+E
Sbjct: 132 ALVQRCKEMEEKLENERSRLEEE 154
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 300 RKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKE 452
RKE + + KRD +++ KD + E Q L E E K A M+++E
Sbjct: 638 RKEEEEQKKRDEEERKRREKEEKDRQFQLEKQRLAEEEQKRQA---MIDQE 685
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 234 NNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELE 413
+ E Q+ EN DK+ D KE + + D E D++ K+ EEM EE++
Sbjct: 33 DKEEMDKQDKENKEDKEEMDKEDKEEMDQEEMDKEDKEEMDKEDKEEMDQEEMD-KEEMD 91
Query: 414 SK 419
+
Sbjct: 92 QE 93
>SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 276 DKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM--QGLEELESKLSAYHVMVEK 449
DK+ + + KE + ++ E D+K K+ E+M Q EE+E K +K
Sbjct: 29 DKEDMEEMDKEEMDQQDKEEMDQEEMDKKDKEDMDQEDMEEQDKEEMEQKDKEDMDEQDK 88
Query: 450 EVLGKRD 470
E + K+D
Sbjct: 89 EDMDKQD 95
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 255 QEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM--QGLEELESKLSA 428
Q+ E + K D ++ + K+D + D++ D + EEM Q EE++ +
Sbjct: 70 QDKEEMEQKDKEDMDEQDKEDMDKQDKEDMDKQDKEEMDKQDKEEMDKQDKEEMDKQDKE 129
Query: 429 YHVMVEKEVLGKRD 470
+KE + K+D
Sbjct: 130 EMDKQDKEEMDKQD 143
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEE 389
K R+ + E + E + +K+L+ KE K + + SSD E DRK + ++ ++
Sbjct: 150 KRKRHKLSCESSSCEESSDSEKRLKKEKNKE-KQRDSSESSSDSEDDRKRRKKKVKKD 206
>SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 219 LARNTNNSEYTMQEIENIGDK-KLRDALRKELKSKSKRDHSSDGEYD--RKHKDSRIMEE 389
++ + N + EI + D+ + + + LKS DHSSDG+ + +D+ ++ E
Sbjct: 117 MSLDANEKDDLESEIGKLEDENRALQSEYERLKSMRDADHSSDGDLSTGSQSRDTELLTE 176
Query: 390 MQGLEELESKLSAYHVMVE 446
+ L + + +L A ++E
Sbjct: 177 AKLLRQHKGRLEARMQVLE 195
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 279 KKLRDALRKELKSKSKRDHSSDGEYDRKHKDS 374
KK+R+ RK+L+ K+K+ + + RKH+D+
Sbjct: 502 KKIRNNERKKLRRKAKKRAKMELQQIRKHRDT 533
>SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2)
Length = 192
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 225 RNTNNSEYTMQEIENIGDKKLRDALRKELKSK-SKRDHSSDGEYDRKHKDSRIMEEMQGL 401
R +E + IE K++ + + K ++ + +KR D E R+ ++++ + E Q L
Sbjct: 30 RKIRAAEREQRLIEEETQKRVEEMVAKRVEEQLAKRKDEIDKEVMRRVEEAKKIMEQQML 89
Query: 402 EELESKLSAYHVMVEKEVLGKRDAR 476
EE E + + G+R R
Sbjct: 90 EEFEKRKQEQIEQLRLREEGERQER 114
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRD-ALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM 392
K+ + ++ QE++ D LRD +K+L + +KR SS E K K+ I E
Sbjct: 386 KMHQEQQAAQTLQQELQGKLDSALRDFEKQKQLLADAKRTESS-LESAIKGKEHTITELG 444
Query: 393 QGLEELESKLSAYHVMVEKEVLGKR 467
Q ++ ++ + + V +++E++ K+
Sbjct: 445 QEIKSMKQEKNRMLVDLDREMMEKK 469
Score = 27.9 bits (59), Expect = 4.6
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +3
Query: 213 AKLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM 392
A A+ E T + + I K+ +A ++LK ++ +G+ K KD+ I E
Sbjct: 718 ANSAKTKEIEELTSRVNQLIETKETSEAHVQQLK-----ENLENGQEVLKRKDTTIQEIS 772
Query: 393 QGLEELESKLSAYHVMVEKEVLGK 464
L+E E+KLS VEK++ K
Sbjct: 773 SALKEAENKLSG----VEKQMAEK 792
>SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19)
Length = 1150
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 220 WHETQTILNTRCRKLKILVTRNLEML*GKN-*KASPRETIVLMESMIESI 366
W+E L+TRCR L+ +N E+ G+ + S +I++ + + E I
Sbjct: 625 WYECLLCLSTRCRTLRYRTLKNSEVRPGQGLSETSDITSIIIRDDVSEEI 674
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 240 SEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESK 419
+E +EIEN K++ D +RK + +++RD + E R+ ++ + E + E E +
Sbjct: 610 AEERKKEIEN-KKKEIDDEMRKLEEERTERDRQKEEERKRREEEEKKKREDEVKREEEGR 668
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 216 KLARNTNNSEYTMQEIENIGDKKLRDALRK--ELKSKSK--RDHSSDGEYDRKHKDSRIM 383
+++ N MQE +LRDAL K ELKS + + SD + + +
Sbjct: 905 EVSENKTKQLSKMQEELQTTSVQLRDALAKVEELKSNKELLQQSLSDSKGESQQMTKNSA 964
Query: 384 EEMQGLEELESKLSAYHVMVEKEV 455
M L+ +S L + V+KE+
Sbjct: 965 ASMYALQTAQSHLEKKYFQVKKEL 988
>SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48)
Length = 598
Score = 27.9 bits (59), Expect = 4.6
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 243 EYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKL 422
E T +E+E + KK +A R E + + E RK ++ +EE Q E+LE +
Sbjct: 331 EETNKEMEQL--KKDLEARRHEYITDINNINLQREEQKRKFEEE--LEEFQNEEKLEERR 386
Query: 423 SAYHV 437
YHV
Sbjct: 387 QRYHV 391
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 231 TNNSEYTMQEIENIGDKKLRDAL---RKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGL 401
T N + +E +G+ LR + +++ +DH SDGE ++ D EE+
Sbjct: 1502 TKNGHASPREQVKVGNAMLRSMVGESKEDCSDGESKDHYSDGESEQDSSDGE-SEEVSSD 1560
Query: 402 EELESKL 422
E S L
Sbjct: 1561 NESSSDL 1567
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 303 KELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKE 452
KE +K K+ H+ DG+ +K K EE L E E + + +KE
Sbjct: 500 KEAPAKKKQKHN-DGDAPKKSKKKLTHEEKLKLAEEEKEKKKQQIQEDKE 548
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 231 TNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEEL 410
++ +++ E ++I K D KELK + K + + KHK+ EE + +E
Sbjct: 110 SSTENHSLLEEKDIPRDKKSD---KELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEK 166
Query: 411 ESKLSAYHVMVEKEVLGKRDARS 479
E EKE K + S
Sbjct: 167 EKTKKEEKESREKEKTKKEEKES 189
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 27.5 bits (58), Expect = 6.1
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 276 DKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKEV 455
+K L+D R+E KS SK + G+ K K+ E Q L E + + VM E+
Sbjct: 623 EKILKDEKRRERKSGSKESTAQSGKISSKEKEILRGELEQCLLESSPQEALERVMQVAEI 682
>SB_23894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 291 DALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM 392
D L SKS+ D SS+GE D + +D EE+
Sbjct: 2 DQWESYLASKSESDSSSEGESDEESEDESEDEEV 35
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 27.5 bits (58), Expect = 6.1
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 213 AKLARNTNNSEYTMQEIENIGD--KKLRDALRKELK-SKSKRDHSSDGEYDRKHKDSRIM 383
AKL TNN E + + + D KK+R KE+K +K K D S + D +K + +
Sbjct: 242 AKLETATNNLERLKKLEKELQDTNKKMRLEKDKEVKEAKEKADTKSKQKIDDNNKLIQTL 301
Query: 384 EEMQGLEELES 416
++ ++ELES
Sbjct: 302 QKR--IKELES 310
>SB_2365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 291 DALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEM 392
D L SKS+ D SS+GE D + +D EE+
Sbjct: 2 DQWESYLASKSESDSSSEGESDEESEDESEDEEV 35
>SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 225 RNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRI 380
R T N Q +E D++ ++ RK +++R +G+ DR+ KDS+I
Sbjct: 12 RKTENGRTERQRMEEQKDREWKE--RKTENGRTERQRM-EGQKDREWKDSQI 60
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 TNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQG-LEE 407
T ++E N D++ R L+ ELK R+ SS+GE K +R +EE++ L
Sbjct: 487 TRQKNQALEEQVNALDERNRK-LKGELKRYQDRNRSSEGE---AQKYARTVEELKNQLNS 542
Query: 408 LESKL 422
+ KL
Sbjct: 543 TQDKL 547
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 294 ALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEE 407
ALR++ KSK +D SD D H+ ++ Q L E
Sbjct: 385 ALREKWKSKEPKDAESDPVPDSPHEAYCVIRRRQALAE 422
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,346,826
Number of Sequences: 59808
Number of extensions: 145275
Number of successful extensions: 659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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