Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0511
(434 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 221 3e-58
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 216 6e-57
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 216 6e-57
SB_56| Best HMM Match : Actin (HMM E-Value=0) 215 2e-56
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 213 4e-56
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 6e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 6e-19
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 1e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 7e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 5e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 2e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.31
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.31
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.41
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.41
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.54
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.54
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 0.72
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 0.72
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 0.72
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 0.72
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 1.7
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 1.7
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 2.2
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 28 2.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 6.7
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 27 8.8
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 221 bits (539), Expect = 3e-58
Identities = 99/103 (96%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 216 bits (528), Expect = 6e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 216 bits (528), Expect = 6e-57
Identities = 96/103 (93%), Positives = 100/103 (97%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 215 bits (524), Expect = 2e-56
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 98 PEEHPVLLTEAPLN 111
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 213 bits (521), Expect = 4e-56
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 98 PEEHPVLLTEAPLN 111
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 6e-47
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Frame = +2
Query: 116 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 289
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 290 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEGT 403
+L + YP+++GIV NWDDM+ +W +TF +++ + P T
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNT 105
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 7e-09
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 262
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 263 GDEAQSKRGILTL 301
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 50.8 bits (116), Expect = 5e-07
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +2
Query: 236 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 397
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 110 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 289
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 290 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 379
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 220 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 104
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 166 CETGLAHT 143
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.41
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 166 CETGLAHT 143
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.41
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 166 CETGLAHT 143
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.41
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 166 CETGLAHT 143
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.54
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 166 CETGLAHT 143
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.54
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 166 CETGLAHT 143
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.54
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 166 CETGLAHT 143
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 370 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 203
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 202 DRGEHGARSIISCETGLAHT 143
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 0.95
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 277 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 166 CETGLAHT 143
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 167
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 166 CETGLAHT 143
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 2.2
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -2
Query: 283 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 119
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 118 GNFFVAHLE 92
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 399 EHPVLLTEAPLN 434
+HPVLLTEAPLN
Sbjct: 126 QHPVLLTEAPLN 137
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTPSP 412
K P HGIVT+++ + W+ + + PE TP P
Sbjct: 3080 KLPNFHGIVTSFEQYPRDWNQWYTSS---EPENTPLP 3113
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 210 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 100
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 277 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 266 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 120
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 272 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 102
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 116 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 220
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -3
Query: 288 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 157
P C S P F +P P W LP+ E N G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 309 GYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPT 202
G + +++ LLL +SSP S PI TP +GL T
Sbjct: 275 GVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 95 KMCDEEVAALVVDNG-SGMCKAGFAGD 172
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,583,288
Number of Sequences: 59808
Number of extensions: 367208
Number of successful extensions: 1014
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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