Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0511
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 222 1e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 222 1e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 222 1e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 222 1e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 222 1e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 222 1e-58
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 221 2e-58
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 219 7e-58
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 215 1e-56
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 183 4e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 5e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 129 1e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 111 2e-25
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 88 2e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 9e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 5e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 5e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 36 0.017
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 35 0.029
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.83
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.83
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 29 1.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.4
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.4
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 4.4
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 222 bits (542), Expect = 1e-58
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 221 bits (539), Expect = 2e-58
Identities = 99/103 (96%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (535), Expect = 7e-58
Identities = 97/103 (94%), Positives = 101/103 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 99 PEEHPVLLTEAPLN 112
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 215 bits (525), Expect = 1e-56
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APE P
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 98 PEEHPVLLTEAPLN 111
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 183 bits (446), Expect = 4e-47
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 331
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 332 NWDDMEKIWHHTFYNELRVAPEGTP 406
NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHP 89
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 85 PEEHPVLLTEAPLN 98
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 5e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDM 346
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 129 bits (311), Expect = 1e-30
Identities = 57/59 (96%), Positives = 57/59 (96%)
Frame = +2
Query: 230 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 55 PEEHPVLLTEAPLN 68
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 111 bits (268), Expect = 2e-25
Identities = 47/96 (48%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 302 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEGTP 406
+YP+EHGIV NW DMEKIW + F ++L++ PE P
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHP 106
Score = 31.1 bits (67), Expect = 0.36
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLT+APLN
Sbjct: 102 PEEHPVLLTDAPLN 115
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 295
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 296 TLKYPIEHGIVTNWDDMEKIWHHTF 370
+ YP+++GIV NWDDM +W HTF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTF 93
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.9 bits (171), Expect = 9e-14
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 241
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 242 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 397
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 5e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 5e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 35.5 bits (78), Expect = 0.017
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD--EAQS 280
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 281 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
KR G + P ++ G++ +W+ EKI H++ N L P P
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHP 125
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 34.7 bits (76), Expect = 0.029
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 405 GVPSGATRSSL*KV*CQIFSMSSQLV-TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTI 229
G PS SS + + S+ V T+ S PL++ +SS S TI
Sbjct: 424 GAPSSTLGSSSSTIVSTTITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTI 483
Query: 228 TP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 103
TP +G+PT N S+P P + STT A +++S
Sbjct: 484 TPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.83
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 284 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 129
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.83
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 284 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 129
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 323 IVTNWDDMEKIWHHTFYNELRVAPEGTPSPAH 418
++ NWD EK W TF+ L+ E P P H
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCIRE-MPIPLH 412
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQG 226
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 202 RGKAPPSGRDGRYGTEG 252
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 337 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 227
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = -3
Query: 360 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIP 235
CQ+FS QLVT+ SMG +++++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,079,339
Number of Sequences: 27780
Number of extensions: 248128
Number of successful extensions: 933
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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