Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0511
(434 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 197 3e-51
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 197 3e-51
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 196 4e-51
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 196 4e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 196 4e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 196 4e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 192 1e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 192 1e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 192 1e-49
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 184 3e-47
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 132 7e-32
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 102 1e-22
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 2e-22
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 80 7e-16
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 73 6e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 65 2e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 3e-05
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 40 0.001
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.048
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.4
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.1
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 3.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.1
At3g05750.1 68416.m00646 expressed protein 27 4.1
At5g37110.1 68418.m04454 hypothetical protein 27 7.2
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 7.2
At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase famil... 26 9.5
At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase famil... 26 9.5
At3g61940.1 68416.m06956 zinc transporter, putative similar to z... 26 9.5
At3g48860.2 68416.m05337 expressed protein 26 9.5
At3g48860.1 68416.m05336 expressed protein 26 9.5
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 9.5
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 26 9.5
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 9.5
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 3e-51
Identities = 88/100 (88%), Positives = 93/100 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 3e-51
Identities = 88/100 (88%), Positives = 93/100 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (479), Expect = 4e-51
Identities = 88/100 (88%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 196 bits (479), Expect = 4e-51
Identities = 88/100 (88%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHP+LLTEAPLN
Sbjct: 100 PEEHPILLTEAPLN 113
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (479), Expect = 4e-51
Identities = 88/100 (88%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 196 bits (479), Expect = 4e-51
Identities = 88/100 (88%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE P
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHP+LLTEAPLN
Sbjct: 100 PEEHPILLTEAPLN 113
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 192 bits (467), Expect = 1e-49
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE P
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 192 bits (467), Expect = 1e-49
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE P
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 192 bits (467), Expect = 1e-49
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE P
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 100 PEEHPVLLTEAPLN 113
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 184 bits (447), Expect = 3e-47
Identities = 78/100 (78%), Positives = 92/100 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PE P
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHP 105
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHP+LLTEAPLN
Sbjct: 101 PEEHPILLTEAPLN 114
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 132 bits (320), Expect = 7e-32
Identities = 60/95 (63%), Positives = 71/95 (74%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 302 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
K P+EHGIV NWDDMEKIWH+TFYNELRV PE P
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAP N
Sbjct: 89 PEEHPVLLTEAPYN 102
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 102 bits (244), Expect = 1e-22
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = +2
Query: 230 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPE P
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHPVLLTEAPLN
Sbjct: 55 PEEHPVLLTEAPLN 68
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (242), Expect = 2e-22
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 295
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 296 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 394
+ YP+ +GIV NWDDME +W H FYNEL++ P
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 79.8 bits (188), Expect = 7e-16
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 16/116 (13%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 241
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 242 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGTP 406
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P P
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 393 PREHPVLLTEAPLN 434
P EHP+LL E PLN
Sbjct: 116 PTEHPMLLAEPPLN 129
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 73.3 bits (172), Expect = 6e-14
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 22/122 (18%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 256
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 257 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEG 400
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 401 TP 406
P
Sbjct: 125 HP 126
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 378 SCVS-PPREHPVLLTEAPLN 434
SC+ P EHP+LL E PLN
Sbjct: 116 SCLMIDPTEHPMLLAEPPLN 135
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 65.3 bits (152), Expect = 2e-11
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 244
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 245 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 397
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPE 118
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 302 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGT 403
+ PI+ G + N D +IW H F + L +AP +
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSS 95
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.8 bits (101), Expect = 3e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 302 -----KYPIEHGIVTNWDDMEKIWHHTF 370
+ P + +V ++ ME I + F
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAF 105
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 295
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 296 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 382
TL PIE G++ +WD ME + + Y L
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGL 81
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.048
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 243 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 106
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 394
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 394
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 354 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 265
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 346 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 239
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 219 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 97
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 283
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 284 RG--ILTLKYPIEHGIVTNWDDMEK 352
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At5g37110.1 68418.m04454 hypothetical protein
Length = 1307
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 409 TGCSLGGDTQLIVEGMMPNLLHVIPVSDDSV 317
T C L G +L P LL+ +P +DD +
Sbjct: 130 TSCCLQGQVKLPFLKNSPELLYALPTNDDEI 160
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 418 VSRTGCSLGGDTQLI-VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIR 254
+ G GG ++ + G+M + ++IP+S V G+ Q +FA+ + YIR
Sbjct: 110 IMAAGICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
>At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 380
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -2
Query: 265 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 89
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 88 V 86
+
Sbjct: 78 L 78
>At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 352
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -2
Query: 265 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 89
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 88 V 86
+
Sbjct: 78 L 78
>At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 334
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 343 VIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRG-EHGARS 176
++ ++D V DG F +F L + + V+L H H G SHD G +G R+
Sbjct: 125 LVQETNDDV-DGFFMVLVAAFGLVVNIIMIVVLGHDHGHGHDHGHSHDHGHSYGERA 180
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 198 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 100
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 198 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 100
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 219 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 133
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +2
Query: 185 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 358
+V P GR QG VGMG + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 232
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,550,218
Number of Sequences: 28952
Number of extensions: 235815
Number of successful extensions: 732
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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