Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0508
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   0.56 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   1.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   1.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   3.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    19   9.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    19   9.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   9.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   9.2  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 0.56
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 228 ASLSSFNICKSVVFPALSSPRNQELARLF 142
           A+ SSF IC   V+P +     QEL  +F
Sbjct: 2   AAASSFFICILGVYPEIQEKVYQELRDIF 30


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 167 LGLDNAGKTTLLHML 211
           LG   AGKTTLL+ L
Sbjct: 110 LGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 167 LGLDNAGKTTLLHML 211
           LG   AGKTTLL+ L
Sbjct: 110 LGSSGAGKTTLLNTL 124


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 164  FLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFD 301
            F G   +GK  L++ ++ +     V   +    E SI S ++TT D
Sbjct: 864  FRGSCGSGKYPLINAMRQELEGYKVKLEYDGPYETSISSGQYTTKD 909


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 252 GCKVGTC*ASLSSFNIC 202
           GCK G C   ++S  +C
Sbjct: 139 GCKKGVCTMEINSDTMC 155


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 153 QALGFWDLTMQGRQHSYIC 209
           +  GF ++  QG   S++C
Sbjct: 329 RTFGFLEIDDQGTVESFVC 347


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 228 ASLSSFNICKSVVFP 184
           +S+S+FN   S VFP
Sbjct: 50  SSVSNFNESSSSVFP 64


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 228 ASLSSFNICKSVVFP 184
           +S+S+FN   S VFP
Sbjct: 50  SSVSNFNESSSSVFP 64


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 186 PALSSPRNQELARLFP*TKKSQHSSEPVEDKHF 88
           PA+S+P+N+    + P   K       + DK++
Sbjct: 460 PAVSNPQNEVDGSVAPKECKQDFMPHELCDKYY 492


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,777
Number of Sequences: 336
Number of extensions: 1322
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)